RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 PDLIM4P50479 330 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 RAP1BP61224 184 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 RAP1AP62834 184 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 GALK2Q01415 458 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 ZBED5Q49AG3 693 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 THEM4Q5T1C6 240 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 ARIH2OSQ8N7S6 290 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 SLC30A7Q8NEW0 376 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 NSMAFQ92636 917 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 PYURFQ96I23 114 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 RBP7Q96R05 134 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 MRPL37Q9BZE1 423 aaKnown RBP16.74■□□□□ 0.27
GMDS-203ENST00000467288 RAB1BQ9H0U4 201 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 C1orf198Q9H425 327 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 MYOZ1Q9NP98 299 aaPredicted RBP16.74■□□□□ 0.27
GMDS-203ENST00000467288 NDE1Q9NXR1 346 aa16.74■□□□□ 0.27
GMDS-203ENST00000467288 VWC2LB2RUY7 222 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 NDUFS8O00217 210 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 CD5LO43866 347 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 PTP4A3O75365 173 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 DIRAS1O95057 198 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 PTHP01270 115 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 CD14P08571 375 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 CDAP32320 146 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 OMPP47874 163 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 RPS23P62266 143 aaKnown RBP16.73■□□□□ 0.27
GMDS-203ENST00000467288 KRT72Q14CN4 511 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 SPATS1Q496A3 300 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 C16orf89Q6UX73 402 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 FOXL2NBQ6ZUU3 175 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 LRRC18Q8N456 261 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 CLDN22Q8N7P3 220 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 NEU4Q8WWR8 484 aaPredicted RBP16.73■□□□□ 0.27
GMDS-203ENST00000467288 FAM46AQ96IP4 442 aaKnown RBP16.73■□□□□ 0.27
GMDS-203ENST00000467288 CCT8L2Q96SF2 557 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 FUZQ9BT04 418 aa16.73■□□□□ 0.27
GMDS-203ENST00000467288 TRBV4-1A0A0J9YWV2 114 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 DYNC1I1O14576 645 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 ARPC2O15144 300 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 CRLF1O75462 422 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 SNAP29O95721 258 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 TP53P04637 393 aaPredicted RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 ITGA2P17301 1181 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 MSX2P35548 267 aaPredicted RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 ERVK-25P63136 954 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 PLP2Q04941 152 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 SEC23BQ15437 767 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 FGD3Q5JSP0 725 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 GKAP1Q5VSY0 366 aaPredicted RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 FAM27BQ5VT28 67 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 CXXC5Q7LFL8 322 aaKnown RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 FAM122BQ7Z309 247 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 DEFB107AQ8IZN7 70 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 ZCCHC24Q8N2G6 241 aaKnown RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 PAQR4Q8N4S7 273 aaPredicted RBP16.72■□□□□ 0.27
GMDS-203ENST00000467288 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 OR1J2Q8NGS2 313 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 NSMCE2Q96MF7 247 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 KCNN2Q9H2S1 579 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 DYNLRB1Q9NP97 96 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 SIGLEC7Q9Y286 467 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 V9GYQ6 96 aa16.72■□□□□ 0.27
GMDS-203ENST00000467288 IQCMA0A1B0GVH7 501 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 LOC390937A0A1W2PQ73 354 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 SLC22A23A1A5C7 686 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 SH3PXD2BA1X283 911 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 TLX2O43763 284 aaPredicted RBP16.71■□□□□ 0.27
GMDS-203ENST00000467288 CCL2P13500 99 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 RPL4P36578 427 aaKnown RBP16.71■□□□□ 0.27
GMDS-203ENST00000467288 SGCAQ16586 387 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 TBC1D28Q2M2D7 210 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 TMEM249Q2WGJ8 235 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 SPATA3Q8NHX4 192 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 Q96M85 177 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 CDH20Q9HBT6 801 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 GRHPRQ9UBQ7 328 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 ADAM18Q9Y3Q7 739 aa16.71■□□□□ 0.27
GMDS-203ENST00000467288 SYNGR3O43761 229 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 AHCYL1O43865 530 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 NDUFB2O95178 105 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 FAM107AO95990 144 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 ERCC1P07992 297 aaPredicted RBP16.7■□□□□ 0.26
GMDS-203ENST00000467288 ADRA2AP08913 450 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 ZNF32P17041 273 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 USF1P22415 310 aaPredicted RBP16.7■□□□□ 0.26
GMDS-203ENST00000467288 MNAT1P51948 309 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 SMIM11AP58511 58 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 MXRA7P84157 204 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 PABPC1L2AQ5JQF8 200 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 LRP11Q86VZ4 500 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 CPEB3Q8NE35 698 aaKnown RBP16.7■□□□□ 0.26
GMDS-203ENST00000467288 FOXN4Q96NZ1 517 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 GPX7Q96SL4 187 aaPredicted RBP16.7■□□□□ 0.26
GMDS-203ENST00000467288 SYT3Q9BQG1 590 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 PIMREGQ9BSJ6 248 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 NDEL1Q9GZM8 345 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 LRMDAQ9H2I8 198 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 CCNB1IP1Q9NPC3 277 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 NRIP3Q9NQ35 241 aa16.7■□□□□ 0.26
GMDS-203ENST00000467288 SONP18583 2426 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms