RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GPANK1O95872 356 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 SCG5P05408 212 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 AGAP20933 346 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 CCKARP32238 428 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 SH3BGRP55822 239 aaPredicted RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 MRPS34P82930 218 aaKnown RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
VCP-204ENST00000466100 APOFQ13790 326 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 SLC35D3Q5M8T2 416 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 DNM1P34Q6PK57 102 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 CLEC18BQ6UXF7 455 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 MEPCEQ7L2J0 689 aaKnown RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 THAP5Q7Z6K1 395 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 GLB1L2Q8IW92 636 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 UBE2J2Q8N2K1 259 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 ZNF433Q8N7K0 673 aaPredicted RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 CLEC18CQ8NCF0 446 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 SLC26A10Q8NG04 563 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 OR51L1Q8NGJ5 315 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 LILRB4Q8NHJ6 448 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 NSMAFQ92636 917 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 BOD1Q96IK1 185 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 SRA1Q9HD15 236 aaKnown RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 TMEM38BQ9NVV0 291 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 MRPL22Q9NWU5 206 aaKnown RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 TAS2R16Q9NYV7 291 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 COQ3Q9NZJ6 369 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 UPB1Q9UBR1 384 aa9.79□□□□□ -0.84
VCP-204ENST00000466100 COA3Q9Y2R0 106 aaPredicted RBP9.79□□□□□ -0.84
VCP-204ENST00000466100 CENPEQ02224 2701 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 WIPF3A6NGB9 483 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 FAM171A2A8MVW0 826 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 ZNF99A8MXY4 864 aaPredicted RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 KRT33AO76009 404 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 TFP02787 698 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 PSKH1P11801 424 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 PSMB1P20618 241 aaKnown RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 GSTT1P30711 240 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 HTR1FP30939 366 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 CDAP32320 146 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 ASCL1P50553 236 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 CDH11P55287 796 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 ARF1P84077 181 aaKnown RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 TFF3Q07654 80 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 CDK5R2Q13319 367 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 GGTLC2Q14390 218 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 P2RY6Q15077 328 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 KCNMB1Q16558 191 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 SMN1Q16637 294 aaKnown RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 NRN1LQ496H8 165 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 MEDAGQ5VYS4 303 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 STAC2Q6ZMT1 411 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 ABHD12BQ7Z5M8 362 aaPredicted RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 LUZP2Q86TE4 346 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 CXorf67Q86X51 503 aaPredicted RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 GID4Q8IVV7 300 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 ZNF808Q8N4W9 903 aaPredicted RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 PROKR2Q8NFJ6 384 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 OR1K1Q8NGR3 316 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 HTRA1Q92743 480 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 CNBD2Q96M20 576 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 FOXN4Q96NZ1 517 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 TEAD3Q99594 435 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 FOXB1Q99853 325 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 RBM24Q9BX46 236 aaKnown RBP9.78□□□□□ -0.84
VCP-204ENST00000466100 OR51V1Q9H2C8 321 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 POLE4Q9NR33 117 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 HAO2Q9NYQ3 351 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 UBAP1Q9NZ09 502 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 MOKQ9UQ07 419 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 TACC2O95359 2948 aa9.78□□□□□ -0.84
VCP-204ENST00000466100 LRBAP50851 2863 aa9.77□□□□□ -0.84
VCP-204ENST00000466100 A0A1W2PPL8 197 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 SH3D21A4FU49 640 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 SLC22A31A6NKX4 558 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 FAM90A27PA6NNH2 459 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 LYZL6O75951 148 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 SEC14L2O76054 403 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 MPZL1O95297 269 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 HRGP04196 525 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 RNF224P0DH78 156 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 LAP3P28838 519 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 CD79BP40259 229 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 SLC15A1P46059 708 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 ZNF84P51523 738 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 NUDT6P53370 316 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 HSF2Q03933 536 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 GLO1Q04760 184 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 ZNF91Q05481 1191 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 TMED1Q13445 227 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 ENDOGQ14249 297 aaKnown RBP9.77□□□□□ -0.85
VCP-204ENST00000466100 GABRA6Q16445 453 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 PCK2Q16822 640 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 KLHL12Q53G59 568 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 SFRP5Q5T4F7 317 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 C9orf135Q5VTT2 229 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 B3GLCTQ6Y288 498 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms