RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MTNR1AP48039 350 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 IDH2P48735 452 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 CCT3P49368 545 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 PRKAA2P54646 552 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 RAG2P55895 527 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 RPL15P61313 204 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 KCNJ10P78508 379 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 CCL8P80075 99 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 LCN2P80188 198 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 MRPS25P82663 173 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 ARF1P84077 181 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 ROR2Q01974 943 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 PAX2Q02962 417 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 NPRL3Q12980 569 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 CEACAM7Q14002 265 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 RBMS2Q15434 407 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 TWIST1Q15672 202 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 GPR68Q15743 365 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 PCGF3Q3KNV8 242 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 ARHGAP11BQ3KRB8 267 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 RFTN2Q52LD8 501 aaPredicted RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 ARMCX4Q5H9R4 360 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 C10orf25Q5T742 122 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 FAM205BPQ63HN1 556 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TYW3Q6IPR3 259 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 ZDHHC24Q6UX98 284 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 RNF165Q6ZSG1 346 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 SZRD1Q7Z422 152 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 LRRC8AQ8IWT6 810 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 ZNF614Q8N883 585 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 OR5D16Q8NGK9 328 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 LINC01006Q8NI28 216 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 OR5P2Q8WZ92 322 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 GTF3AQ92664 365 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 RAB1CQ92928 201 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 UPRTQ96BW1 309 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 DDIT4LQ96D03 193 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TRIM44Q96DX7 344 aaPredicted RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 KTI12Q96EK9 354 aaPredicted RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 L3HYPDHQ96EM0 354 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TSSK3Q96PN8 268 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 HINT3Q9NQE9 182 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 RRAGDQ9NQL2 400 aaPredicted RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 C1orf109Q9NX04 203 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 ZNF224Q9NZL3 707 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TMEM216Q9P0N5 145 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 ATP6V1HQ9UI12 483 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 PRDM4Q9UKN5 801 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 ZNF346Q9UL40 294 aaKnown RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 MKLN1Q9UL63 735 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 FAF1Q9UNN5 650 aaPredicted RBP3.08□□□□□ -1.92
RBM39-220ENST00000455343 RCE1Q9Y256 329 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 SLC35A3Q9Y2D2 325 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 TMED7Q9Y3B3 224 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 CACNG2Q9Y698 323 aa3.08□□□□□ -1.92
RBM39-220ENST00000455343 LOC102725191A0A1B0GVB3 256 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 MDFIC2A0A1B0GVS7 189 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 AGAP5A6NIR3 686 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 DUXAA6NLW8 204 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 ZNF99A8MXY4 864 aaPredicted RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 FTCDNL1E5RQL4 147 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 H3BQF6 201 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 M0R3H8 397 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 AP3D1O14617 1153 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 AKAP10O43572 662 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 SEC22BO75396 215 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 CLPTM1O96005 669 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 IGHV3-13P01766 116 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 HLA-HP01893 362 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 PRB2P02812 416 aaPredicted RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 OPN1MWP04001 364 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 SERPINA5P05154 406 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 OPN1MW2P0DN77 364 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 OPN1MW3P0DN78 364 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 PF4V1P10720 104 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 LAMP1P11279 417 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 CCNA2P20248 432 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 EFNA1P20827 205 aaPredicted RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 TACR3P29371 465 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 CD80P33681 288 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 POLR2HP52434 150 aaKnown RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 PLTPP55058 493 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 KRTAP10-6P60371 365 aaPredicted RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 RPS23P62266 143 aaKnown RBP3.07□□□□□ -1.92
RBM39-220ENST00000455343 CAV1Q03135 178 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 FUT5Q11128 374 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 OR7A5Q15622 319 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 GSTA3Q16772 222 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 IMPG1Q17R60 797 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 GSG1Q2KHT4 349 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 CEACAM16Q2WEN9 425 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 HFEQ30201 348 aa3.07□□□□□ -1.92
RBM39-220ENST00000455343 TRMT5Q32P41 509 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms