RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SOX6P35712 828 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 RPS27P42677 84 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 EIF1AXP47813 144 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 CLDN17P56750 224 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PPIAP62937 165 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PCK2Q16822 640 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 ZNF404Q494X3 552 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 SLC18B1Q6NT16 456 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 MS4A15Q8N5U1 240 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 GHSRQ92847 366 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 DCLRE1CQ96SD1 692 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 NXF2Q9GZY0 626 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 KCNN2Q9H2S1 579 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 MMP27Q9H306 513 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 GALNT8Q9NY28 637 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PSMD9O00233 223 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 MPZL1O95297 269 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ABHD16AO95870 558 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 IL1AP01583 271 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 SPARCP09486 303 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 INHBBP09529 407 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 NR2C1P13056 603 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ZNF823P16415 610 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 LHX2P50458 406 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 FOXC1Q12948 553 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 TMEM91Q6ZNR0 172 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 MCFD2Q8NI22 146 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 CPNE4Q96A23 557 aaPredicted RBP12.68□□□□□ -0.38
USP39-207ENST00000450066 TTYH2Q9BSA4 534 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 CDADC1Q9BWV3 514 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 HSPB2A8KAH6 182 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 KLK10O43240 276 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 UPK3AO75631 287 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 AQP8O94778 261 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 OR8G3PP0DMU2 310 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ROM1Q03395 351 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 DYNC1I2Q13409 638 aaKnown RBP12.68□□□□□ -0.38
USP39-207ENST00000450066 HSPB2Q16082 182 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 MEP1BQ16820 701 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 LIPNQ5VXI9 398 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 CARD17Q5XLA6 110 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 FAM109AQ8N4B1 249 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 YIPF7Q8N8F6 280 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 NSMAFQ92636 917 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
USP39-207ENST00000450066 OR2M2Q96R28 347 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 SLC6A15Q9H2J7 730 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 ING1Q9UK53 422 aaPredicted RBP12.68□□□□□ -0.38
USP39-207ENST00000450066 IKZF2Q9UKS7 526 aa12.68□□□□□ -0.38
USP39-207ENST00000450066 LAMA5O15230 3695 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ACOT7O00154 380 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 CDRT1O95170 752 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 CD8BP10966 210 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ZNF708P17019 499 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 EDNRAP25101 427 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 LAP3P28838 519 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 PSMB10P40306 273 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
USP39-207ENST00000450066 CLDN18P56856 261 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 SLC10A1Q14973 349 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 BCL2A1Q16548 175 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 OTPQ5XKR4 325 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 KCTD18Q6PI47 426 aaPredicted RBP12.67□□□□□ -0.38
USP39-207ENST00000450066 SLC25A47Q6Q0C1 308 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 TRILQ7L0X0 811 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
USP39-207ENST00000450066 OR6Q1Q8NGQ2 317 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 ZNF385AQ96PM9 386 aaKnown RBP12.67□□□□□ -0.38
USP39-207ENST00000450066 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 AMELYQ99218 206 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 SNTG1Q9NSN8 517 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 CSAG2Q9Y5P2 127 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
USP39-207ENST00000450066 GPRIN2O60269 458 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 SC5DO75845 299 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ZNF432O94892 652 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 SERPINA3P01011 423 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 QDPRP09417 244 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 SDC2P34741 201 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 RORCP51449 518 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 EIF2B1Q14232 305 aaKnown RBP12.66□□□□□ -0.38
USP39-207ENST00000450066 INSL4Q14641 139 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 LRFN4Q6PJG9 635 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ZNF679Q8IYX0 411 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 TMEM123Q8N131 208 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 TMEM54Q969K7 222 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 SLC25A46Q96AG3 418 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms