RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 H7C1C5 153 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 GNGT2O14610 69 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 PPP1R3DO95685 299 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 PTHP01270 115 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 BMP4P12644 408 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 APEHP13798 732 aaKnown RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 PAX1P15863 534 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 ZNF14P17017 642 aaPredicted RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CALCRP30988 508 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 APOBEC3AP31941 199 aaPredicted RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CDAP32320 146 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 GSSP48637 474 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 FXYD6P3P58550 94 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 LCN6P62502 163 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 PLP2Q04941 152 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 SGCAQ16586 387 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 MESTQ5EB52 335 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 Q5PR19 223 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 DTX2Q86UW9 622 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 MUC15Q8N387 334 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 LRRC18Q8N456 261 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CLDN22Q8N7P3 220 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 AQP11Q8NBQ7 271 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 NUP37Q8NFH4 326 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 OR9Q2Q8NGE9 314 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 OR52L1Q8NGH7 329 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 OR4C15Q8NGM1 316 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 RASD2Q96D21 266 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 SAMD8Q96LT4 415 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 ERMAPQ96PL5 475 aaPredicted RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 TRAF4Q9BUZ4 470 aaPredicted RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 IFT27Q9BW83 186 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 GRIP2Q9C0E4 1043 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 SEC61A2Q9H9S3 476 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 NOX3Q9HBY0 568 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CCNB1IP1Q9NPC3 277 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CBLN4Q9NTU7 201 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 ZNF701Q9NV72 531 aaPredicted RBP9.94□□□□□ -0.82
COL28A1-203ENST00000435823 SLC7A8Q9UHI5 535 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 SPEF1Q9Y4P9 236 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 UGT2A1Q9Y4X1 527 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 U3KQV3 271 aa9.94□□□□□ -0.82
COL28A1-203ENST00000435823 CSMD1Q96PZ7 3565 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 IGKV1D-43A0A0B4J1Z2 117 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 IGHV2OR16-5A0A0B4J2B6 119 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 IQCMA0A1B0GVH7 501 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 SLC22A23A1A5C7 686 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 OVOL3O00110 214 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 SOCS2O14508 198 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 IMPA2O14732 288 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 TXNDC12O95881 172 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 SERPINA5P05154 406 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 PATE4P0C8F1 98 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 GSTM3P21266 225 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 NOS3P29474 1203 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 ATP5J2P56134 94 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 GALK2Q01415 458 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 HSF2Q03933 536 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 PPP1R8Q12972 351 aaKnown RBP9.93□□□□□ -0.82
COL28A1-203ENST00000435823 DAG1Q14118 895 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 RAB39AQ14964 217 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 MICAQ29983 383 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 VHLLQ6RSH7 139 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 ZNF620Q6ZNG0 422 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 MYPOPQ86VE0 399 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-203ENST00000435823 JAZF1Q86VZ6 243 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 TGIF2LYQ8IUE0 185 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 LURAP1LQ8IV03 231 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 OR10G2Q8NGC3 310 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 OR1J2Q8NGS2 313 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 HTRA1Q92743 480 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 NABP1Q96AH0 204 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 ZNF75AQ96N20 296 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 LRMDAQ9H2I8 198 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 C1orf198Q9H425 327 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 CA10Q9NS85 328 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 CDH10Q9Y6N8 788 aa9.93□□□□□ -0.82
COL28A1-203ENST00000435823 PRRC2AP48634 2157 aaKnown RBP9.92□□□□□ -0.82
COL28A1-203ENST00000435823 AKAP9Q99996 3911 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 TCRBV3S1A0A5B6 114 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 ARPC3O15145 178 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 IDH3BO43837 385 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 FKBP6O75344 327 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 E2F6O75461 281 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 KHDRBS3O75525 346 aaKnown RBP9.92□□□□□ -0.82
COL28A1-203ENST00000435823 CIB2O75838 187 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 RENP00797 406 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 GASTP01350 101 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 CD8AP01732 235 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 MSR1P21757 451 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 CRABP1P29762 137 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 CDKN1AP38936 164 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 PCBD1P61457 104 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 ADAM8P78325 824 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 CBX1P83916 185 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 SNTB2Q13425 540 aaKnown RBP9.92□□□□□ -0.82
COL28A1-203ENST00000435823 TBC1D28Q2M2D7 210 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 FAM27BQ5VT28 67 aa9.92□□□□□ -0.82
COL28A1-203ENST00000435823 ZNF770Q6IQ21 691 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms