RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
ATP2C1-204ENST00000428331 EDARQ9UNE0 448 aa9.78□□□□□ -0.84
ATP2C1-204ENST00000428331 CEP350Q5VT06 3117 aa9.78□□□□□ -0.84
ATP2C1-204ENST00000428331 TRBV5-5A0A0J9YX44 114 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 NUDT19A8MXV4 375 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 DNASE2O00115 360 aaPredicted RBP9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 IGFALSP35858 605 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 HTRA4P83105 476 aaPredicted RBP9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 FAM78AQ5JUQ0 283 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 FHL5Q5TD97 284 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 ZNF595Q8IYB9 648 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 RCBTB1Q8NDN9 531 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 OR13C3Q8NGS6 347 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 C4orf45Q96LM5 186 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 SLC6A7Q99884 636 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 ZNF768Q9H5H4 540 aaKnown RBP9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 LRIT1Q9P2V4 623 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 MSRAQ9UJ68 235 aa9.77□□□□□ -0.84
ATP2C1-204ENST00000428331 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ZNF345Q14585 488 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ELOCQ15369 112 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 AVPI1Q5T686 147 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 C3orf33Q6P1S2 294 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 PAPD4Q6PIY7 484 aaKnown RBP9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 LRRTM1Q86UE6 522 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ZSCAN1Q8NBB4 408 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 OR9A4Q8NGU2 314 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ZPLD1Q8TCW7 415 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 FAM3CQ92520 227 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 C3orf49Q96BT1 292 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 CAPNS2Q96L46 248 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ZNF75AQ96N20 296 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 CHMP1AQ9HD42 196 aaPredicted RBP9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 STARD5Q9NSY2 213 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 CPNE7Q9UBL6 633 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 PRSS44E7EML9 344 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 IMPA2O14732 288 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 FARS2O95363 451 aaKnown RBP9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 PEG10Q86TG7 708 aaKnown RBP9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 SFTPA1Q8IWL2 248 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 CLEC1AQ8NC01 280 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 OR4K17Q8NGC6 315 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 GPX8Q8TED1 209 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 SCGB3A2Q96PL1 93 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 FBXO4Q9UKT5 387 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 TBX21Q9UL17 535 aa9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 MDC1Q14676 2089 aaKnown RBP9.77□□□□□ -0.85
ATP2C1-204ENST00000428331 CBX5P45973 191 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 EFNB2P52799 333 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 MOB3CQ70IA8 216 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 CA13Q8N1Q1 262 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 OR1S2Q8NGQ3 325 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 TRIM43Q96BQ3 446 aaPredicted RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 SCN2AQ99250 2005 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 A0A0J9YY10 115 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 UPK3AO75631 287 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 ALOX5APP20292 161 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 BDKRB2P30411 391 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 LSSP48449 732 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 TAS2R31P59538 309 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 PSG6Q00889 435 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 SPOCK1Q08629 439 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 ZNF141Q15928 474 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 C2orf27AQ580R0 203 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 KLHL24Q6TFL4 600 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 PRSS41Q7RTY9 318 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 NMNAT2Q9BZQ4 307 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 CENPMQ9NSP4 180 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 A0A0A6YYH2 397 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 A6NJ64 397 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 GPR31O00270 319 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 SIGLEC5O15389 551 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 GJA4P35212 333 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 PPIAP62937 165 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 SIGLEC14Q08ET2 396 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 VWA2Q5GFL6 755 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 PABPC1L2AQ5JQF8 200 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 MAMDC2Q7Z304 686 aaPredicted RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 LYG2Q86SG7 212 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 COMMD2Q86X83 199 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 METTL8Q9H825 291 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 SERGEFQ9UGK8 458 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 ZNF346Q9UL40 294 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 TNFSF18Q9UNG2 199 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 HIF3AQ9Y2N7 669 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 MRPS2Q9Y399 296 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 TP53BP1Q12888 1972 aaPredicted RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 FITM1A5D6W6 292 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 ITGB2P05107 769 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 MAOAP21397 527 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 RAB13P51153 203 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 ZNF74Q16587 644 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
ATP2C1-204ENST00000428331 WDR38Q5JTN6 314 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms