RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 SLC35D3Q5M8T2 416 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 AADACL4Q5VUY2 407 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ANKRD16Q6P6B7 361 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 CXorf67Q86X51 503 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 GID4Q8IVV7 300 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 PROKR2Q8NFJ6 384 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 KISS1RQ969F8 398 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 RFKQ969G6 155 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 HCAR1Q9BXC0 346 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ANKRD60Q9BZ19 345 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 OR51V1Q9H2C8 321 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 Q9H521 79 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 MED20Q9H944 212 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 SIAEQ9HAT2 523 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 FAM90A27PA6NNH2 459 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 C16orf97H3BN30 126 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 M0R129 80 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 HOXB1P14653 301 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-204ENST00000427239 GABRB1P18505 474 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 FOXG1P55316 489 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-204ENST00000427239 KLHL12Q53G59 568 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 C1QTNF12Q5T7M4 302 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 FOXL2NBQ6ZUU3 175 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 CCDC36Q8IYA8 594 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 RNASE6Q93091 150 aaKnown RBP13.54□□□□□ -0.24
COL11A1-204ENST00000427239 TEAD3Q99594 435 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 TMEM38BQ9NVV0 291 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 UGT2A1Q9Y4X1 527 aa13.54□□□□□ -0.24
COL11A1-204ENST00000427239 SLC22A31A6NKX4 558 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 LYZL6O75951 148 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 GLCEO94923 617 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 HRGP04196 525 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 GYPBP06028 91 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 FMO3P31513 532 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 HSF2Q03933 536 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 TMED1Q13445 227 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 CDSNQ15517 529 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 GABRA6Q16445 453 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 C9orf135Q5VTT2 229 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 MEPCEQ7L2J0 689 aaKnown RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 THAP5Q7Z6K1 395 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 SLC22A24Q8N4F4 322 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 STEAP2Q8NFT2 490 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 OR10A4Q9H209 315 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 NELFAQ9H3P2 528 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 USP9XQ93008 2570 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 A0A1W2PPL8 197 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 NKX2-6A6NCS4 301 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 CLUP10909 449 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 SLC2A5P22732 501 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 MYF6P23409 242 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 CDAP32320 146 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 UGT2B10P36537 528 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 APOFQ13790 326 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 KCNMB1Q16558 191 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 C11orf91Q3C1V1 193 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF813Q6ZN06 617 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 BBS1Q8NFJ9 593 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 SSC4DQ8WTU2 575 aa13.53□□□□□ -0.24
COL11A1-204ENST00000427239 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL11A1-204ENST00000427239 COL12A1Q99715 3063 aa13.52□□□□□ -0.24
COL11A1-204ENST00000427239 HELZ2Q9BYK8 2649 aaKnown RBP13.52□□□□□ -0.25
COL11A1-204ENST00000427239 TENM4Q6N022 2769 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 SH3D21A4FU49 640 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 CLEC18AA5D8T8 446 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 FAM171A2A8MVW0 826 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.25
COL11A1-204ENST00000427239 HLA-DQA2P01906 255 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 IL32P24001 234 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 PYCR1P32322 319 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 RPS7P62081 194 aaKnown RBP13.52□□□□□ -0.25
COL11A1-204ENST00000427239 LSM6P62312 80 aaKnown RBP13.52□□□□□ -0.25
COL11A1-204ENST00000427239 TEKQ02763 1124 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 TFF3Q07654 80 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 SRSF1Q07955 248 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL11A1-204ENST00000427239 SGCAQ16586 387 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 LINC01590Q5TEZ4 76 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 LCN1P1Q5VSP4 162 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 CLEC18BQ6UXF7 455 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 SSX8Q7RTT4 187 aa13.52□□□□□ -0.25
COL11A1-204ENST00000427239 BCDIN3DQ7Z5W3 292 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms