RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SH3GL3Q99963 347 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 THTPAQ9BU02 230 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 LRMDAQ9H2I8 198 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 ZNF442Q9H7R0 627 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 NOX3Q9HBY0 568 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 SIGLEC7Q9Y286 467 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 DSCAMO60469 2012 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 CADP27708 2225 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 FAM171A2A8MVW0 826 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 H7C417 338 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 TNFRSF11BO00300 401 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 PTP4A3O75365 173 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 IGHV4-39P01824 125 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SERPINA5P05154 406 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 OR4A8P0C604 315 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 PATE4P0C8F1 98 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ZNF14P17017 642 aaPredicted RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 FPR3P25089 353 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SDHAP31040 664 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SLC6A6P31641 620 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 LIMS1P48059 325 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 HSF2Q03933 536 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 TRAP1Q12931 704 aaKnown RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 KRR1Q13601 381 aaKnown RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 FHL1Q13642 323 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SGCAQ16586 387 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 TBC1D28Q2M2D7 210 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 C11orf71Q6IPW1 123 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 KRT80Q6KB66 452 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SLC25A47Q6Q0C1 308 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 SMARCD3Q6STE5 483 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ZER1Q7Z7L7 766 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 BIVMQ86UB2 503 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 MYPOPQ86VE0 399 aaPredicted RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 SLC30A7Q8NEW0 376 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ZNF519Q8TB69 540 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 GNPDA2Q8TDQ7 276 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 NMD3Q96D46 503 aaKnown RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 GPX7Q96SL4 187 aaPredicted RBP9.48□□□□□ -0.89
USP49-204ENST00000423567 FUZQ9BT04 418 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 PLK3Q9H4B4 646 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 CDH20Q9HBT6 801 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ZNF224Q9NZL3 707 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ADAM18Q9Y3Q7 739 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 AKAP9Q99996 3911 aa9.48□□□□□ -0.89
USP49-204ENST00000423567 ITPR3Q14573 2671 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 TEX13CA0A0J9YWL9 993 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 TCRBV5S2A0A599 114 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 SLC22A23A1A5C7 686 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 PRSS37A4D1T9 235 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 H7C1C5 153 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 H7C1Q1 480 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 SMAD7O15105 426 aaKnown RBP9.47□□□□□ -0.89
USP49-204ENST00000423567 ERCC1P07992 297 aaPredicted RBP9.47□□□□□ -0.89
USP49-204ENST00000423567 INHBBP09529 407 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 HOXB6P17509 224 aaKnown RBP9.47□□□□□ -0.89
USP49-204ENST00000423567 MSR1P21757 451 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 NR4A1P22736 598 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 CDAP32320 146 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 APLNRP35414 380 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 THBS4P35443 961 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 MAGEA2P43356 314 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 DSCR9P59020 149 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 PCBD1P61457 104 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 LCN6P62502 163 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 MS4A2Q01362 244 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 HGFACQ04756 655 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 EFNB3Q15768 340 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 ADIPOQQ15848 244 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 MESTQ5EB52 335 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 ADCK1Q86TW2 530 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 JAZF1Q86VZ6 243 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 ALDH16A1Q8IZ83 802 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 CLDN22Q8N7P3 220 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 HTRA1Q92743 480 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 CLPTM1LQ96KA5 538 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 Q96M85 177 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 BTBD10Q9BSF8 475 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 IFT27Q9BW83 186 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 OR52D1Q9H346 318 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 REEP1Q9H902 201 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 NRIP3Q9NQ35 241 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 DLL4Q9NR61 685 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 IL20RAQ9UHF4 553 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 SLC7A8Q9UHI5 535 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 GDF2Q9UK05 429 aaPredicted RBP9.47□□□□□ -0.89
USP49-204ENST00000423567 CMAHPQ9Y471 501 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 UGT2A1Q9Y4X1 527 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 IER3IP1Q9Y5U9 82 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 LYVE1Q9Y5Y7 322 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 FKBP7Q9Y680 259 aa9.47□□□□□ -0.89
USP49-204ENST00000423567 ALPK2Q86TB3 2170 aa9.46□□□□□ -0.89
USP49-204ENST00000423567 HIVEP1P15822 2718 aa9.46□□□□□ -0.89
USP49-204ENST00000423567 ARID1AO14497 2285 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms