RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 GPATCH11Q8N954 259 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 LILRB4Q8NHJ6 448 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 C17orf50Q8WW18 174 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 RLN3Q8WXF3 142 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 SAMSN1Q9NSI8 373 aaKnown RBP2.17□□□□□ -2.06
ATG4C-204ENST00000414558 FAM49BQ9NUQ9 324 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 CRCT1Q9UGL9 99 aa2.17□□□□□ -2.06
ATG4C-204ENST00000414558 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 BICDL2A1A5D9 508 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 CCL21O00585 134 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 EIF3GO75821 320 aaKnown RBP eCLIP2.16□□□□□ -2.06
ATG4C-204ENST00000414558 ERLIN2O94905 339 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 IGHDP01880 384 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 TGFBR1P36897 503 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 GRIA1P42261 906 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 IRX3P78415 501 aaPredicted RBP2.16□□□□□ -2.06
ATG4C-204ENST00000414558 IFT88Q13099 833 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 RGNQ15493 299 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 DNAJC24Q6P3W2 148 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 VSTM4Q8IW00 320 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 OR4K5Q8NGD3 323 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 FLYWCH2Q96CP2 140 aaKnown RBP2.16□□□□□ -2.06
ATG4C-204ENST00000414558 MTMR9Q96QG7 549 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 PPA2Q9H2U2 334 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 RIBC2Q9H4K1 309 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 FBXO6Q9NRD1 293 aaPredicted RBP2.16□□□□□ -2.06
ATG4C-204ENST00000414558 ZNF230Q9UIE0 474 aaPredicted RBP2.16□□□□□ -2.06
ATG4C-204ENST00000414558 IKBKGQ9Y6K9 419 aa2.16□□□□□ -2.06
ATG4C-204ENST00000414558 GOLGA8SH3BPF8 625 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 DNASE2O00115 360 aaPredicted RBP2.15□□□□□ -2.07
ATG4C-204ENST00000414558 DTYMKP23919 212 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 DCKP27707 260 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 ATP1B3P54709 279 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 MRPL28Q13084 256 aaKnown RBP2.15□□□□□ -2.07
ATG4C-204ENST00000414558 IL15RAQ13261 267 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 PON2Q15165 354 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 PDZK1Q5T2W1 519 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 TRPV1Q8NER1 839 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 OR13G1Q8NGZ3 307 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 OR1P1Q8NH06 330 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 TVP23CQ96ET8 276 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 SH3GL1Q99961 368 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 TCHPQ9BT92 498 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 AZI2Q9H6S1 392 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 KLHL28Q9NXS3 571 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 SHROOM3Q8TF72 1996 aa2.15□□□□□ -2.07
ATG4C-204ENST00000414558 CT62P0C5K7 136 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 ZNF806P0C7X5 589 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 CD1CP29017 333 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 CDKN1BP46527 198 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 ZNF138P52744 262 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 NUTF2P61970 127 aaKnown RBP2.14□□□□□ -2.07
ATG4C-204ENST00000414558 CCDC92Q53HC0 331 aaPredicted RBP2.14□□□□□ -2.07
ATG4C-204ENST00000414558 THEM4Q5T1C6 240 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 ZSCAN30Q86W11 494 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 ST20-AS1Q8NBB2 130 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 TMEM104Q8NE00 496 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 RPRD1AQ96P16 312 aaPredicted RBP2.14□□□□□ -2.07
ATG4C-204ENST00000414558 COPS8Q99627 209 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 FRMD8P1Q9BZ68 369 aaPredicted RBP2.14□□□□□ -2.07
ATG4C-204ENST00000414558 LHX5Q9H2C1 402 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 POLE4Q9NR33 117 aa2.14□□□□□ -2.07
ATG4C-204ENST00000414558 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 K7EQM0 130 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 IQCF3P0C7M6 154 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 IL1RNP18510 177 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 MAS1LP35410 378 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 VHLP40337 213 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 CCT3P49368 545 aaKnown RBP2.13□□□□□ -2.07
ATG4C-204ENST00000414558 BPIFB3P59826 476 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 BAMBIQ13145 260 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 CLINT1Q14677 625 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 ANKRD22Q5VYY1 191 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 Q6ZPB1 254 aaPredicted RBP2.13□□□□□ -2.07
ATG4C-204ENST00000414558 FAM83FQ8NEG4 500 aaPredicted RBP2.13□□□□□ -2.07
ATG4C-204ENST00000414558 SLC25A46Q96AG3 418 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 PIK3IP1Q96FE7 263 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 ZNF607Q96SK3 696 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 NMRAL1Q9HBL8 299 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 SLC35D1Q9NTN3 355 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 ENOPH1Q9UHY7 261 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 SHANK1Q9Y566 2161 aa2.13□□□□□ -2.07
ATG4C-204ENST00000414558 ZNF735P0CB33 412 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 DBTP11182 482 aaKnown RBP2.12□□□□□ -2.07
ATG4C-204ENST00000414558 TNFSF9P41273 254 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 FBXW4P57775 412 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 ZSCAN26Q16670 478 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 OR2T34Q8NGX1 318 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 CIRBP-AS1Q8TBR5 109 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 STMN2Q93045 179 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 COQ2Q96H96 371 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 CNN2Q99439 309 aaKnown RBP2.12□□□□□ -2.07
ATG4C-204ENST00000414558 TBL1YQ9BQ87 522 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 RAB33BQ9H082 229 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 FN3KRPQ9HA64 309 aa2.12□□□□□ -2.07
ATG4C-204ENST00000414558 TRAV6A0A075B6T7 132 aa2.11□□□□□ -2.07
ATG4C-204ENST00000414558 IGHV3OR16-8A0A075B7F1 116 aa2.11□□□□□ -2.07
ATG4C-204ENST00000414558 SOX15O60248 233 aa2.11□□□□□ -2.07
ATG4C-204ENST00000414558 CCNB1P14635 433 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms