RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 POMT2Q9UKY4 750 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ASPMQ8IZT6 3477 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 FOSL1P15407 271 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 ZP1P60852 638 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL6A2-204ENST00000409416 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
COL6A2-204ENST00000409416 SGCAQ16586 387 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 KCTD20Q7Z5Y7 419 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF101Q8IZC7 436 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 C3orf49Q96BT1 292 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 TM4SF19Q96DZ7 209 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 PDCD10Q9BUL8 212 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 COMMD4Q9H0A8 199 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 UBQLN4Q9NRR5 601 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
COL6A2-204ENST00000409416 EMC9Q9Y3B6 208 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 MYO7BQ6PIF6 2116 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 A0A087WV62 115 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 ICAM2P13598 275 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
COL6A2-204ENST00000409416 CFAP77Q6ZQR2 320 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OR11G2Q8NGC1 345 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OR1L3Q8NH93 324 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 ARL5BQ96KC2 179 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 GPR137Q96N19 417 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OR5B2Q96R09 309 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 SCPEP1Q9HB40 452 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 MEIKINA0A087WXM9 373 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 TRAV1-2A0A0B4J238 106 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 RPS4Y1P22090 263 aaKnown RBP12.12□□□□□ -0.47
COL6A2-204ENST00000409416 CDAP32320 146 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 TMEM225Q6GV28 225 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 FAM180AQ6UWF9 173 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 PLXDC2Q6UX71 529 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 KCTD9Q7L273 389 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 NPEPL1Q8NDH3 523 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OR1F2PQ96R84 312 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 JAM3Q9BX67 310 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 OR5V1Q9UGF6 321 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 SUSD2Q9UGT4 822 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
COL6A2-204ENST00000409416 CADP27708 2225 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 OR5K4A6NMS3 321 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 CREBL2O60519 120 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-204ENST00000409416 TRAPPC6AO75865 159 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 NKX2-2O95096 273 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 MGAT2Q10469 447 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 OPCMLQ14982 345 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 GLB1L2Q8IW92 636 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 LRRC18Q8N456 261 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ANGPTL6Q8NI99 470 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ACTR6Q9GZN1 396 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ELF5Q9UKW6 265 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 UBE2QL1A1L167 161 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 OGG1O15527 345 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 CELA2AP08217 269 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ARFIP1P53367 373 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 C19orf57Q0VDD7 668 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 FAM69AQ5T7M9 428 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 EEF1A1P5Q5VTE0 462 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SLC35F3Q8IY50 421 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 MR1Q95460 341 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF524Q96C55 264 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 GPN1Q9HCN4 374 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-204ENST00000409416 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 NTMQ9P121 344 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 PCDHGA9Q9Y5G4 932 aaKnown RBP12.11□□□□□ -0.47
COL6A2-204ENST00000409416 AIPO00170 330 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 GOSR2O14653 212 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SUSD5O60279 629 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-204ENST00000409416 TACSTD2P09758 323 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SULT1A3P0DMM9 295 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 SULT1A4P0DMN0 295 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 CAPZBP47756 277 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 P2RX1P51575 399 aa12.11□□□□□ -0.47
COL6A2-204ENST00000409416 YPEL5P62699 121 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms