RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ANGPTL4Q9BY76 406 aa13.58□□□□□ -0.23
COL25A1-201ENST00000399126 BARHL1Q9BZE3 327 aa13.58□□□□□ -0.23
COL25A1-201ENST00000399126 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.23
COL25A1-201ENST00000399126 ISYNA1Q9NPH2 558 aa13.58□□□□□ -0.23
COL25A1-201ENST00000399126 SSR3Q9UNL2 185 aa13.58□□□□□ -0.23
COL25A1-201ENST00000399126 PCDHGB6Q9Y5F9 930 aa13.58□□□□□ -0.23
COL25A1-201ENST00000399126 BOD1L1Q8NFC6 3051 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 CTDSP2O14595 271 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 PTTG1O95997 202 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 PSKH1P11801 424 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 BMP4P12644 408 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 CARD18P57730 90 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 CHAF1BQ13112 559 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 ETFDHQ16134 617 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 SGCAQ16586 387 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 TBRG1Q3YBR2 411 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 ACER2Q5QJU3 275 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 ATP1A1-AS1Q5TC04 95 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 BEST3Q8N1M1 668 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 ARMC10Q8N2F6 343 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 OR6Q1Q8NGQ2 317 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF519Q8TB69 540 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 DDIT4LQ96D03 193 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 THOC3Q96J01 351 aaKnown RBP13.58□□□□□ -0.24
COL25A1-201ENST00000399126 PLSCR3Q9NRY6 295 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 SNTG1Q9NSN8 517 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 KLHDC2Q9Y2U9 406 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
COL25A1-201ENST00000399126 CD8B2A6NJW9 211 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 LIPT2A6NK58 231 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF208O43345 1280 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SERPINA7P05543 415 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 CD8BP10966 210 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 GABRA5P31644 462 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 RPL27P61353 136 aaKnown RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 LGALS3BPQ08380 585 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 PUDPQ08623 228 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ACSM1Q08AH1 577 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 FAM209BQ5JX69 171 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF227Q86WZ6 799 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 NXPE2Q96DL1 559 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 WDR76Q9H967 626 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 MED29Q9NX70 200 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ING1Q9UK53 422 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SLC35F4A4IF30 521 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZNF814B7Z6K7 855 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 TSPAN4O14817 238 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SLC25A1P53007 311 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 POU4F2Q12837 409 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 LCN1P1Q5VSP4 162 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 GPR139Q6DWJ6 353 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ARL9Q6T311 187 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 POMGNT2Q8NAT1 580 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 KCNS3Q9BQ31 491 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 TSPAN10Q9H1Z9 355 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 PTGES2Q9H7Z7 377 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 INPP5EQ9NRR6 644 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 EIF3KQ9UBQ5 218 aaKnown RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 CHTOPQ9Y3Y2 248 aaKnown RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SHISA3A0PJX4 238 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SLC30A4O14863 429 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 CDRT1O95170 752 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 MT-ND5P03915 603 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 PDGFAP04085 211 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 YES1P07947 543 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 DDOSTP39656 456 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 PPP5CP53041 499 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 TLE3Q04726 772 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SLC35D3Q5M8T2 416 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 C3orf33Q6P1S2 294 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-201ENST00000399126 POC5Q8NA72 575 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 GPR87Q9BY21 358 aa13.57□□□□□ -0.24
COL25A1-201ENST00000399126 C21orf140B9A014 251 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 XKRYO14609 159 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 RAMP1O60894 148 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 UPK1BO75841 260 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 OR2T7P0C7T2 308 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 LIFP15018 202 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 IFNGR1P15260 489 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 DPP4P27487 766 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 CAV3P56539 151 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 ACTC1P68032 377 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 ACTA1P68133 377 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 POU3F1Q03052 451 aaPredicted RBP13.56□□□□□ -0.24
COL25A1-201ENST00000399126 SLC3A1Q07837 685 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 KRTCAP3Q53RY4 240 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 H3F3CQ6NXT2 135 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 C5orf46Q6UWT4 87 aa13.56□□□□□ -0.24
COL25A1-201ENST00000399126 H1FNTQ75WM6 255 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms