RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CD47Q08722 323 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 MOGQ16653 247 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 LRRC18Q8N456 261 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 MRPL13Q9BYD1 178 aaKnown RBP14.74□□□□□ -0.05
HMGN1-204ENST00000380749 RACGAP1Q9H0H5 632 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 SMURF2Q9HAU4 748 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 LPAR2Q9HBW0 351 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 C20orf141Q9NUB4 165 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 HIF1ANQ9NWT6 349 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 METRNQ9UJH8 293 aa14.74□□□□□ -0.05
HMGN1-204ENST00000380749 TPD52L2O43399 206 aaKnown RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 SHOX2O60902 331 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 MMP7P09237 267 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 GAAP10253 952 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 IFNA8P32881 189 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 ZNF133P52736 654 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 UCP2P55851 309 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 ERVS71-1P61550 626 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 CCL8P80075 99 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 MRPS34P82930 218 aaKnown RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TEKQ02763 1124 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 PIN1Q13526 163 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 LRRC23Q53EV4 343 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 UNQ6126/PRO20091Q6UXV3 157 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 LIPHQ8WWY8 451 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TSPAN32Q96QS1 320 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 SIAEQ9HAT2 523 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 NKIRAS2Q9NYR9 191 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 FAM157AC9JC47 383 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 CDC14BO60729 498 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 SLC2A10O95528 541 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 ITGA2P17301 1181 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 CCNOP22674 350 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 GLO1Q04760 184 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TAF11Q15544 211 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 PABPC1L2AQ5JQF8 200 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 ARMC4Q5T2S8 1044 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 PCYOX1LQ8NBM8 494 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 OR1J1Q8NGS3 322 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 MOSPD2Q8NHP6 518 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TXNIPQ9H3M7 391 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 OCEL1Q9H607 264 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 METTL17Q9H7H0 456 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-204ENST00000380749 DECR2Q9NUI1 292 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TREM2Q9NZC2 230 aa14.73□□□□□ -0.05
HMGN1-204ENST00000380749 TRAV20A0A0B4J274 112 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 HTR3EA5X5Y0 456 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 FAM220BPB1ANY3 271 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 TSPAN19P0C672 248 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 ZNF32P17041 273 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 STOMP27105 288 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 CDAP32320 146 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 OR1E2P47887 323 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 ST3GAL3Q11203 375 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 TOP3AQ13472 1001 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-204ENST00000380749 CYBRD1Q53TN4 286 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 ALG10Q5BKT4 473 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 TEX29Q8N6K0 151 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 FNDC8Q8TC99 324 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 C10orf82Q8WW14 230 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 RAB39BQ96DA2 213 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 TPD52L3Q96J77 140 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 PRRC1Q96M27 445 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 LRRC37BQ96QE4 947 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 ALG12Q9BV10 488 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 SAP30LQ9HAJ7 183 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 GID8Q9NWU2 228 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 HIF3AQ9Y2N7 669 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 UGT2A1Q9Y4X1 527 aa14.72□□□□□ -0.05
HMGN1-204ENST00000380749 IGHV1-69-2A0A0G2JMI3 117 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 CLDN25C9JDP6 229 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 WNT9BO14905 357 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 ANPEPP15144 967 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 GCH1P30793 250 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 ARFIP2P53365 341 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 FMODQ06828 376 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 KLF10Q13118 480 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 SGCAQ16586 387 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 FAM205BPQ63HN1 556 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 USP51Q70EK9 711 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 OR2T12Q8NG77 320 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 LZICQ8WZA0 190 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 NSMAFQ92636 917 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 HDAC2Q92769 488 aaKnown RBP14.71□□□□□ -0.06
HMGN1-204ENST00000380749 NABP1Q96AH0 204 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 TIMD4Q96H15 378 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 ZNF583Q96ND8 569 aa14.71□□□□□ -0.06
HMGN1-204ENST00000380749 EIF3KQ9UBQ5 218 aaKnown RBP14.71□□□□□ -0.06
HMGN1-204ENST00000380749 A0A0A6YYJ9 748 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 PLSCR5A0PG75 271 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 PIP5K1CO60331 668 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 PNPP00491 289 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 IGHV3-13P01766 116 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 IFI30P13284 250 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 GUCA1AP43080 201 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-204ENST00000380749 CRYBB2P43320 205 aa14.7□□□□□ -0.06
HMGN1-204ENST00000380749 GDI2P50395 445 aaKnown RBP14.7□□□□□ -0.06
HMGN1-204ENST00000380749 RPL27P61353 136 aaKnown RBP14.7□□□□□ -0.06
HMGN1-204ENST00000380749 LMO4P61968 165 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms