RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TMEM154Q6P9G4 183 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 ICA1LQ8NDH6 482 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 MOSPD2Q8NHP6 518 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 CLDND2Q8NHS1 167 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 SYNPRQ8TBG9 265 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 C11orf40Q8WZ69 217 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 LZICQ8WZA0 190 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 TPD52L3Q96J77 140 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 PRRC1Q96M27 445 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 ZNF416Q9BWM5 594 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 BCL2L14Q9BZR8 327 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 ZNF275Q9NSD4 429 aaPredicted RBP18.02■□□□□ 0.48
VSX1-201ENST00000376707 A4GNTQ9UNA3 340 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 NPIPB13A6NJU9 1138 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 NPIPB4C9JG80 1138 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 PPIHO43447 177 aaKnown RBP18.01■□□□□ 0.47
VSX1-201ENST00000376707 MGRN1O60291 552 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 NCR1O76036 304 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 ZNF250P15622 560 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 APLNRP35414 380 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 UCP2P55851 309 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 ST3GAL3Q11203 375 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 C10orf128Q5T292 105 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 GLCCI1Q86VQ1 547 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 ZNF519Q8TB69 540 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 YIPF5Q969M3 257 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 HOPXQ9BPY8 73 aaPredicted RBP18.01■□□□□ 0.47
VSX1-201ENST00000376707 SIAEQ9HAT2 523 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 CCNB1IP1Q9NPC3 277 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 HINT3Q9NQE9 182 aaKnown RBP18.01■□□□□ 0.47
VSX1-201ENST00000376707 SLCO1C1Q9NYB5 712 aa18.01■□□□□ 0.47
VSX1-201ENST00000376707 C17orf100A8MU93 164 aa18■□□□□ 0.47
VSX1-201ENST00000376707 SLC2A10O95528 541 aa18■□□□□ 0.47
VSX1-201ENST00000376707 MMP7P09237 267 aaPredicted RBP18■□□□□ 0.47
VSX1-201ENST00000376707 IFNA8P32881 189 aa18■□□□□ 0.47
VSX1-201ENST00000376707 MAGEB1P43366 347 aa18■□□□□ 0.47
VSX1-201ENST00000376707 ZNF133P52736 654 aaPredicted RBP18■□□□□ 0.47
VSX1-201ENST00000376707 ERVS71-1P61550 626 aa18■□□□□ 0.47
VSX1-201ENST00000376707 MRPS34P82930 218 aaKnown RBP18■□□□□ 0.47
VSX1-201ENST00000376707 LIPEQ05469 1076 aa18■□□□□ 0.47
VSX1-201ENST00000376707 CD47Q08722 323 aa18■□□□□ 0.47
VSX1-201ENST00000376707 LAPTM4AQ15012 233 aa18■□□□□ 0.47
VSX1-201ENST00000376707 ARMC4Q5T2S8 1044 aa18■□□□□ 0.47
VSX1-201ENST00000376707 HACD2Q6Y1H2 254 aa18■□□□□ 0.47
VSX1-201ENST00000376707 RINLQ6ZS11 566 aa18■□□□□ 0.47
VSX1-201ENST00000376707 RFLNBQ8N5W9 214 aa18■□□□□ 0.47
VSX1-201ENST00000376707 TSPAN32Q96QS1 320 aa18■□□□□ 0.47
VSX1-201ENST00000376707 EFCAB1Q9HAE3 211 aa18■□□□□ 0.47
VSX1-201ENST00000376707 SMURF2Q9HAU4 748 aa18■□□□□ 0.47
VSX1-201ENST00000376707 GMPR2Q9P2T1 348 aaKnown RBP18■□□□□ 0.47
VSX1-201ENST00000376707 IGLV3-9A0A075B6K5 115 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 NME4O00746 187 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TCF21O43680 179 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TFP02787 698 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 NR2C1P13056 603 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 DRD4P21917 467 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 CCNOP22674 350 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 CDAP32320 146 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 SLC7A2P52569 658 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 CCL8P80075 99 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TOP3AQ13472 1001 aaPredicted RBP17.99■□□□□ 0.47
VSX1-201ENST00000376707 PCGF3Q3KNV8 242 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 ALG10Q5BKT4 473 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 PABPC1L2AQ5JQF8 200 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TREML1Q86YW5 311 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 NSMAFQ92636 917 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 HDAC2Q92769 488 aaKnown RBP17.99■□□□□ 0.47
VSX1-201ENST00000376707 RACGAP1Q9H0H5 632 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TXNIPQ9H3M7 391 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 LPAR2Q9HBW0 351 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 TREM2Q9NZC2 230 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 HIF3AQ9Y2N7 669 aa17.99■□□□□ 0.47
VSX1-201ENST00000376707 GMNCA6NCL1 334 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 CXCR6O00574 342 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 CDC14BO60729 498 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 RP2O75695 350 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 MT-ND5P03915 603 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 IFNW1P05000 195 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 FMODQ06828 376 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 SGCAQ16586 387 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 MOGQ16653 247 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 VTCN1Q7Z7D3 282 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 OR1J1Q8NGS3 322 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 NMD3Q96D46 503 aaKnown RBP17.98■□□□□ 0.47
VSX1-201ENST00000376707 BPIFA2Q96DR5 249 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 MAN2C1Q9NTJ4 1040 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 UGT2A1Q9Y4X1 527 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 SNX13Q9Y5W8 968 aa17.98■□□□□ 0.47
VSX1-201ENST00000376707 FAM157AC9JC47 383 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 NDUFAB1O14561 156 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 WNT9BO14905 357 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 TPD52L2O43399 206 aaKnown RBP17.97■□□□□ 0.47
VSX1-201ENST00000376707 MSMBP08118 114 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 IFI30P13284 250 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 ZNF32P17041 273 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 FUT4P22083 530 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms