RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKN-204ENST00000366896 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 RELL2Q8NC24 303 aaPredicted RBP13.32□□□□□ -0.28
PRKN-204ENST00000366896 RCBTB1Q8NDN9 531 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 ADAMTS18Q8TE60 1221 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 MIB2Q96AX9 1013 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 CCDC3Q9BQI4 270 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
PRKN-204ENST00000366896 MFFQ9GZY8 342 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 PLCL2Q9UPR0 1127 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 CACNA1EQ15878 2313 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 TMEM131Q92545 1883 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 ADH7P40394 386 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 PI4KAP42356 2102 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 HOXA1P49639 335 aaPredicted RBP13.32□□□□□ -0.28
PRKN-204ENST00000366896 STX4Q12846 297 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 NUP54Q7Z3B4 507 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 EXD3Q8N9H8 876 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 C3orf49Q96BT1 292 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 MNTQ99583 582 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 TSPAN10Q9H1Z9 355 aaPredicted RBP13.32□□□□□ -0.28
PRKN-204ENST00000366896 BARX1Q9HBU1 254 aaPredicted RBP13.32□□□□□ -0.28
PRKN-204ENST00000366896 HIF3AQ9Y2N7 669 aa13.32□□□□□ -0.28
PRKN-204ENST00000366896 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 PRKNO60260 465 aaPredicted RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 CTNSO60931 367 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ZFPL1O95159 310 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 TXNDC12O95881 172 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 CFPP27918 469 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 SKP1P63208 163 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 HSPB2Q16082 182 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 Q499Y3 187 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 MUC20Q8N307 709 aaPredicted RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 OR10K1Q8NGX5 313 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ALG12Q9BV10 488 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 SLITRK2Q9H156 845 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 FKRPQ9H9S5 495 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 MRTO4Q9UKD2 239 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 TRBV5-5A0A0J9YX44 114 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ZNF432O94892 652 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 CSTAP01040 98 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 UBBP0CG47 229 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 PNMTP11086 282 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 PGDP52209 483 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 UBE2MP61081 183 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 RPS27AP62979 156 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 UBA52P62987 128 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 MC2RQ01718 297 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ELOCQ15369 112 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 LPAL2Q16609 132 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 LRRN1Q6UXK5 716 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ZNF595Q8IYB9 648 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 OR4C3Q8NH37 302 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 ASB13Q8WXK3 278 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 TSSK2Q96PF2 358 aa13.31□□□□□ -0.28
PRKN-204ENST00000366896 MRPS33Q9Y291 106 aaKnown RBP13.31□□□□□ -0.28
PRKN-204ENST00000366896 A0A0A6YYC8 382 aaPredicted RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 TMEM272A0A1B0GTI8 110 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 I3L1I5 382 aaPredicted RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 EIF4E2O60573 245 aaKnown RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 CT45A8P0DMV1 189 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 CT45A9P0DMV2 189 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 RNH1P13489 461 aaKnown RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 MGMTP16455 207 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 GPR3P46089 330 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKN-204ENST00000366896 SORDQ00796 357 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 ERV3-1Q14264 604 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 CT45A2Q5DJT8 189 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 STAC2Q6ZMT1 411 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 FAM122BQ7Z309 247 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 GLB1L2Q8IW92 636 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 LRRC75AQ8NAA5 344 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 OR4C16Q8NGL9 310 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 LMX1AQ8TE12 382 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 SLC37A2Q8TED4 501 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 SEMA6CQ9H3T2 930 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 SCPEP1Q9HB40 452 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 KLHDC2Q9Y2U9 406 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 R4GN57 208 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 RFPL4AA6NLU0 287 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 RFPL4AL1F8VTS6 287 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 UPK3AO75631 287 aa13.3□□□□□ -0.28
PRKN-204ENST00000366896 GLSO94925 669 aaPredicted RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 RPP14O95059 124 aaKnown RBP13.3□□□□□ -0.28
PRKN-204ENST00000366896 CD14P08571 375 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms