RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SASS6Q6UVJ0 657 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 TEX43Q6ZNM6 134 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 PEX26Q7Z412 305 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 CDR2LQ86X02 465 aaPredicted RBP2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 B3GNT7Q8NFL0 401 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 OR10G4Q8NGN3 311 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 OR10R2Q8NGX6 335 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 OR4S2Q8NH73 311 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 AKR7LQ8NHP1 331 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 UBALD1Q8TB05 177 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 PIK3IP1Q96FE7 263 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 ATP5SQ99766 215 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 NDFIP1Q9BT67 221 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 ZNF430Q9H8G1 570 aaPredicted RBP2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 NTN4Q9HB63 628 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 FGF20Q9NP95 211 aaPredicted RBP2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 KCNJ16Q9NPI9 418 aa2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
RNU6-560P-201ENST00000364007 IGSF9BQ9UPX0 1349 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 IGLV4-60A0A075B6I1 120 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 SYNJ2BP-COX16A0A087WUM0 186 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 ZNF816-ZNF321PA0A0X1KG74 233 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 A0A1W2PP18 115 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 DPM1O60762 260 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 TSPAN13O95857 204 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 NDUFB10O96000 172 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 MAS1LP35410 378 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 CEACAM6P40199 344 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 PMELP40967 661 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 CCNHP51946 323 aaPredicted RBP2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 RAP1AP62834 184 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 MOBPQ13875 183 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 CLINT1Q14677 625 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 UBE2SQ16763 222 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 VPS26BQ4G0F5 336 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 TMEM107Q6UX40 140 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 HDDC2Q7Z4H3 204 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 NANOGNBQ7Z5D8 188 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 OAFQ86UD1 273 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 FAM228AQ86W67 206 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 H1FOOQ8IZA3 346 aaPredicted RBP2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 TTC5Q8N0Z6 440 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 PDIK1LQ8N165 341 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 FBXL13Q8NEE6 735 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 OR2L8Q8NGY9 312 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 KCNG3Q8TAE7 436 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 LKAAEAR1Q8TD35 194 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 SLC2A14Q8TDB8 520 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 CREB3L1Q96BA8 519 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 PKNOX2Q96KN3 472 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 PSMC3IPQ9P2W1 217 aaPredicted RBP2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 ING4Q9UNL4 249 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
RNU6-560P-201ENST00000364007 H0Y8G0 127 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 MRPS12O15235 138 aaKnown RBP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 EEDO75530 441 aaKnown RBP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 PALMO75781 387 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 CLPXO76031 633 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 RAB3DO95716 219 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 RHOXF2BP0C7M4 288 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 TNNI1P19237 187 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 CALRP27797 417 aaKnown RBP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 PBLDP30039 288 aaPredicted RBP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 NSG1P42857 185 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 CSNK1A1P48729 337 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SULT1E1P49888 294 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 MXD1Q05195 221 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 TWF1Q12792 350 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 MAB21L1Q13394 359 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 GINS1Q14691 196 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SSX2Q16385 188 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 PTPN20Q4JDL3 420 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 CCNJQ5T5M9 372 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 ANKRD22Q5VYY1 191 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 CCDC73Q6ZRK6 1079 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 LIX1Q8N485 282 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 ZFP41Q8N8Y5 198 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SPATA4Q8NEY3 305 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SLC7A13Q8TCU3 470 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 GPR151Q8TDV0 419 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 PIBF1Q8WXW3 757 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 KIFAP3Q92845 792 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SERPINB12Q96P63 405 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 RPP21Q9H633 154 aaKnown RBP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 C12orf10Q9HB07 376 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 SCN1AP35498 2009 aa2.46□□□□□ -2.02
RNU6-560P-201ENST00000364007 IGHV3-74A0A0B4J1X5 117 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 XKRY2A2RUG3 117 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 RAB29O14966 203 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 SRP72O76094 671 aaKnown RBP2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 CRYGBP07316 175 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 AQP2P41181 271 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 SSR4P51571 173 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 ZNF138P52744 262 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 SLC25A11Q02978 314 aaKnown RBP2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 ERCC8Q13216 396 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 RGNQ15493 299 aa2.45□□□□□ -2.02
RNU6-560P-201ENST00000364007 CEMP1Q6PRD7 247 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms