RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PCDHGB7Q9Y5F8 929 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 A8MV72 311 aaPredicted RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 ZNHIT1O43257 154 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 IDH3BO43837 385 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 TNFSF15O95150 251 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 PNPP00491 289 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 ACSM1Q08AH1 577 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 SRSF6Q13247 344 aaKnown RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 GGTLC2Q14390 218 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 DEFB124Q8NES8 71 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 ZNF519Q8TB69 540 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 TRMT10AQ8TBZ6 339 aaKnown RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 LIPHQ8WWY8 451 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 RNF166Q96A37 237 aaPredicted RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 ZNF700Q9H0M5 742 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 INPP5EQ9NRR6 644 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 SERINC1Q9NRX5 453 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 NXT1Q9UKK6 140 aaKnown RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 PPIEQ9UNP9 301 aaKnown RBP15.78■□□□□ 0.12
NPAS3-202ENST00000356141 SVILO95425 2214 aa15.78■□□□□ 0.12
NPAS3-202ENST00000356141 LIPT2A6NK58 231 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 PCP4L1A6NKN8 68 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 ADRB1P08588 477 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 ATF1P18846 271 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 MFGE8Q08431 387 aaPredicted RBP15.77■□□□□ 0.12
NPAS3-202ENST00000356141 NDUFAF7Q7L592 441 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 ST8SIA1Q92185 356 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 TTC9Q92623 222 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 THOC3Q96J01 351 aaKnown RBP15.77■□□□□ 0.12
NPAS3-202ENST00000356141 ZFP3Q96NJ6 502 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 SDHAF3Q9NRP4 125 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 DKKL1Q9UK85 242 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 PCSK5Q92824 1860 aa15.77■□□□□ 0.12
NPAS3-202ENST00000356141 H3BUI4 141 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 TP53I11O14683 189 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 OR2T1O43869 369 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 MT-CO3P00414 261 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 MT-ATP6P00846 226 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 CSF3P09919 207 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 SLC2A1P11166 492 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 RAB3BP20337 219 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 APOBEC1P41238 236 aaKnown RBP15.77■□□□□ 0.11
NPAS3-202ENST00000356141 PLA2G2CQ5R387 149 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 LRFN4Q6PJG9 635 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 CDC20BQ86Y33 519 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 BEST3Q8N1M1 668 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 JAM3Q9BX67 310 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 PROK2Q9HC23 129 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 CHST11Q9NPF2 352 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 PFDN2Q9UHV9 154 aa15.77■□□□□ 0.11
NPAS3-202ENST00000356141 SULT2B1O00204 365 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 UPK3AO75631 287 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 PRKACAP17612 351 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 SLC35D3Q5M8T2 416 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 PRSS35Q8N3Z0 413 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 OR4M1Q8NGD0 313 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 ZNF671Q8TAW3 534 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 WACQ9BTA9 647 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 PTGES2Q9H7Z7 377 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 TMEM9BQ9NQ34 198 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 LOC102723996A0A087X1L8 192 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 TNFSF11O14788 317 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 GP1BAP07359 652 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 ALOX5APP20292 161 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 GFOD2Q3B7J2 385 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 HSD17B12Q53GQ0 312 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 SLC22A10Q63ZE4 541 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 GPR139Q6DWJ6 353 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 ZNF517Q6ZMY9 492 aaPredicted RBP15.76■□□□□ 0.11
NPAS3-202ENST00000356141 PRSS45Q7RTY3 260 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 DCXRQ7Z4W1 244 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 PLCZ1Q86YW0 608 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 MISPQ8IVT2 679 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 Q8N402 240 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 OR5AK2Q8NH90 309 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 KLHL15Q96M94 604 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 MRPL15Q9P015 296 aaKnown RBP15.76■□□□□ 0.11
NPAS3-202ENST00000356141 DOCK7Q96N67 2140 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 LANCL1O43813 399 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 LMX1BO60663 402 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 RPS15P62841 145 aaKnown RBP15.76■□□□□ 0.11
NPAS3-202ENST00000356141 ZNF181Q2M3W8 571 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 RPL22L1Q6P5R6 122 aaKnown RBP15.76■□□□□ 0.11
NPAS3-202ENST00000356141 C16orf54Q6UWD8 224 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 OR1J4Q8NGS1 313 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 AP3S1Q92572 193 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 MRPL39Q9NYK5 338 aaKnown RBP15.76■□□□□ 0.11
NPAS3-202ENST00000356141 A3GALT2U3KPV4 340 aa15.76■□□□□ 0.11
NPAS3-202ENST00000356141 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 LCN1P31025 176 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 SRP9P49458 86 aaKnown RBP15.75■□□□□ 0.11
NPAS3-202ENST00000356141 SLC25A1P53007 311 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 CLDN20P56880 219 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 C3orf33Q6P1S2 294 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 TUBA3EQ6PEY2 450 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 ELMOD2Q8IZ81 293 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 STK35Q8TDR2 534 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 TSEN15Q8WW01 171 aaKnown RBP15.75■□□□□ 0.11
NPAS3-202ENST00000356141 ABHD6Q9BV23 337 aa15.75■□□□□ 0.11
NPAS3-202ENST00000356141 HDHD2Q9H0R4 259 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms