RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CDHR4A6H8M9 788 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 DOK2O60496 412 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 RP2O75695 350 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ARSBP15848 533 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 BIDP55957 195 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CRMP1Q14194 572 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 P2RY14Q15391 338 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 FCN2Q15485 313 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ABHD17CQ6PCB6 329 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 FAM57BQ71RH2 274 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CDCA4Q9BXL8 241 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 TAS2R8Q9NYW2 309 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 RCE1Q9Y256 329 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM269A0A1B0GVZ9 245 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 IDH3GP51553 393 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 FAPQ12884 760 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 PCGF3Q3KNV8 242 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 PRSS45Q7RTY3 260 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 SYNPRQ8TBG9 265 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 IL1F10Q8WWZ1 152 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 GHSRQ92847 366 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 C8orf44Q96CB5 159 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 STACQ99469 402 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 SLC6A7Q99884 636 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 RBFOX1Q9NWB1 397 aaKnown RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 MIA3Q5JRA6 1907 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 NINQ8N4C6 2090 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 LRIT2A6NDA9 550 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CD300LBA8K4G0 201 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 GOSR2O14653 212 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 HOXC8P31273 242 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CLDN15P56746 228 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 SEC61A1P61619 476 aaKnown RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 INSL4Q14641 139 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CLDN22Q8N7P3 220 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 OR4M1Q8NGD0 313 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 RNF128Q8TEB7 428 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ST8SIA1Q92185 356 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CPNE4Q96A23 557 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 GDF15Q99988 308 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM100Q9NV29 134 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 MICAL3Q7RTP6 2002 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 CRYZL1O95825 349 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 F13BP05160 661 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 DEFA4P12838 97 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ST6GAL1P15907 406 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 EPHA1P21709 976 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 OPRM1P35372 400 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 GRB2P62993 217 aaKnown RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 FABP5Q01469 135 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ARL16Q0P5N6 197 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 H1FNTQ75WM6 255 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-202ENST00000346436 KLHDC8BQ8IXV7 354 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 OR5J2Q8NH18 312 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ABHD4Q8TB40 342 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 RAB1CQ92928 201 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 COQ10AQ96MF6 247 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ATF6BQ99941 703 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 PLA2G12AQ9BZM1 189 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 MAN2C1Q9NTJ4 1040 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 HIF1ANQ9NWT6 349 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 FBXL4Q9UKA2 621 aa9.94□□□□□ -0.82
CLCN6-202ENST00000346436 ADH4P08319 380 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 MEOX1P50221 254 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 FABP6P51161 128 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 NXNL2Q5VZ03 156 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 VASNQ6EMK4 673 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 RAB12Q6IQ22 244 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ELP4Q96EB1 424 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GNRHR2Q96P88 292 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SIDT1Q9NXL6 827 aaKnown RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 MOKQ9UQ07 419 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 PRAMEF4O60810 478 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 RNPS1Q15287 305 aaKnown RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 TRMT12Q53H54 448 aaKnown RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 PRAMEF9Q5VWM5 478 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SLC35D2Q76EJ3 337 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 FCRLAQ7L513 359 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 KCTD20Q7Z5Y7 419 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 LRRC28Q86X40 367 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 LILRB2Q8N423 598 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM99Q8N816 258 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 AMER3Q8N944 861 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ANKRD53Q8N9V6 530 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GALNT11Q8NCW6 608 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SLC7A6Q92536 515 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 DPF1Q92782 380 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 KCNE3Q9Y6H6 103 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 A0A0B4J203 849 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 APOC3P02656 99 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 S100A9P06702 114 aaKnown RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 IKZF1Q13422 519 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GPR50Q13585 617 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 FAM69AQ5T7M9 428 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SLC48A1Q6P1K1 146 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SFXN4Q6P4A7 337 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms