RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 DHHO43323 396 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 ADRA2AP08913 450 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 PATE4P0C8F1 98 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 HTR1FP30939 366 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 OR3A2P47893 321 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 ADAM8P78325 824 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 GLO1Q04760 184 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 MEDAGQ5VYS4 303 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 FBXW9Q5XUX1 488 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 TMEM154Q6P9G4 183 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CORO6Q6QEF8 472 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SPATC1Q76KD6 591 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 OR6K3Q8NGY3 331 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 OR6N2Q8NGY6 317 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 RFKQ969G6 155 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 FKBP7Q9Y680 259 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 FAM208BQ5VWN6 2430 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 KHDRBS3O75525 346 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 RAD51DO75771 328 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 GLCEO94923 617 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 TFP02787 698 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SPARCP09486 303 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CTSSP25774 331 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CEACAM8P31997 349 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CAPZA2P47755 286 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CHN2P52757 468 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC25A1P53007 311 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 TUBA1BP68363 451 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 TUBA4AP68366 448 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 DNM1P34Q6PK57 102 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC25A47Q6Q0C1 308 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 KLHL24Q6TFL4 600 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 TUBA1AQ71U36 451 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 ATCAYQ86WG3 371 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 GGHQ92820 318 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 CCDC120Q96HB5 630 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 B3GAT2Q9NPZ5 323 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 MRPL22Q9NWU5 206 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 POLR1DQ9Y2S0 133 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 FLNCQ14315 2725 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 DIDO1Q9BTC0 2240 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 FAM90A27PA6NNH2 459 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 MAGEB4O15481 346 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 HOXD4P09016 255 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 CRHBPP24387 322 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 LAP3P28838 519 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 DPY19L4Q7Z388 723 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 GLB1L2Q8IW92 636 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 OR10H4Q8NGA5 316 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 LGALS12Q96DT0 336 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 FOXB1Q99853 325 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 UGT2A1Q9Y4X1 527 aa13.55□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF84P51523 738 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ARF1P84077 181 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ST3GAL4Q11206 333 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 SNTB1Q13884 538 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 HIKESHIQ53FT3 197 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 POMGNT2Q8NAT1 580 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 CNN2Q99439 309 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 COPS4Q9BT78 406 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 GP6Q9HCN6 339 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 SCN3BQ9NY72 215 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 SNTNA6NMZ2 147 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 CGAP01215 116 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ITGA5P08648 1049 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ADORA2A-AS1P86434 159 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 TEKQ02763 1124 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 CDSNQ15517 529 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 STK11Q15831 433 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF813Q6ZN06 617 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC26A10Q8NG04 563 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 SFXN3Q9BWM7 321 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 CDADC1Q9BWV3 514 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 KCNG2Q9UJ96 466 aa13.54□□□□□ -0.24
PDLIM5-202ENST00000318007 HIVEP3Q5T1R4 2406 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF593O00488 134 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 IL18BPO95998 194 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 WNT11O96014 354 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 GAAP10253 952 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 NR2C1P13056 603 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms