RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PCSK5Q92824 1860 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 A0A087WZY1 265 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 TRBV5-5A0A0J9YX44 114 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 SNPHO15079 494 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 PLA2G10O15496 165 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 WNT11O96014 354 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ICAM2P13598 275 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 LIFP15018 202 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 KIR3DL2P43630 455 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 SOX2P48431 317 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ROM1Q03395 351 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ODF4Q2M2E3 257 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 B3GNTL1Q67FW5 361 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 GTPBP8Q8N3Z3 284 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF676Q8N7Q3 588 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ADPRHL1Q8NDY3 354 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 OR10AC1Q8NH08 325 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 C4orf45Q96LM5 186 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 C11orf54Q9H0W9 315 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 DOCK10Q96BY6 2186 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 KLK2P20151 261 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 CARTPTQ16568 116 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 WDR38Q5JTN6 314 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 FDX2Q6P4F2 183 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 KRT77Q7Z794 578 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 GPAT4Q86UL3 456 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 UEVLDQ8IX04 471 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 OR1J4Q8NGS1 313 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 COMMD4Q9H0A8 199 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 BRD7Q9NPI1 651 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ABRACLQ9P1F3 81 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 HDGFL3Q9Y3E1 203 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 PCNX2A6NKB5 2137 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 TRABD2BA6NFA1 517 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ANKRD61A6NGH8 418 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 TMEM212A6NML5 194 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 H3BSH0 61 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ZIC3O60481 467 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 RAMP1O60894 148 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 KHDRBS3O75525 346 aaKnown RBP16.41■□□□□ 0.22
CCDC43-201ENST00000315286 PNPP00491 289 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 HPP00738 406 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 HLA-DQB1P01920 261 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF823P16415 610 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 TALDO1P37837 337 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 RPS15P62841 145 aaKnown RBP16.41■□□□□ 0.22
CCDC43-201ENST00000315286 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 TRIQKQ629K1 86 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 TMEM225Q6GV28 225 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 KCTD18Q6PI47 426 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF433Q8N7K0 673 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF454Q8N9F8 522 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 OR51A4Q8NGJ6 313 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 RNF128Q8TEB7 428 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 EDEM2Q9BV94 578 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 MRPL13Q9BYD1 178 aaKnown RBP16.41■□□□□ 0.22
CCDC43-201ENST00000315286 P4HTMQ9NXG6 502 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 KLHL13Q9P2N7 655 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 CLEC4AQ9UMR7 237 aa16.41■□□□□ 0.22
CCDC43-201ENST00000315286 MT-CO3P00414 261 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 FKBP2P26885 142 aaKnown RBP16.4■□□□□ 0.22
CCDC43-201ENST00000315286 DSCR4P56555 118 aaPredicted RBP16.4■□□□□ 0.22
CCDC43-201ENST00000315286 RASGEF1BQ0VAM2 473 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 TEX30Q5JUR7 227 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 TIGD3Q6B0B8 471 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 OR7E24Q6IFN5 339 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 UBE2J2Q8N2K1 259 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 C19orf18Q8NEA5 215 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 IL17RDQ8NFM7 739 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 PPP1R14AQ96A00 147 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 KCNJ15Q99712 375 aa16.4■□□□□ 0.22
CCDC43-201ENST00000315286 SULT2B1O00204 365 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 PDCD5O14737 125 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 TRAF3IP2O43734 574 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF254O75437 659 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 RBMS1P29558 406 aaKnown RBP16.39■□□□□ 0.21
CCDC43-201ENST00000315286 DHRS13Q6UX07 377 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 STAC2Q6ZMT1 411 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 TMPPEQ6ZT21 453 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 LINC00346Q8IVM7 164 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 OR52N5Q8NH56 324 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 MIB2Q96AX9 1013 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 SGCZQ96LD1 299 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 RBP7Q96R05 134 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 SLC22A4Q9H015 551 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC43-201ENST00000315286 TMEM9BQ9NQ34 198 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 TEKT2Q9UIF3 430 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 SLC22A13Q9Y226 551 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF432O94892 652 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 MAPK3P27361 379 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-201ENST00000315286 PITPNBP48739 271 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 CAMK2DQ13557 499 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 PCK2Q16822 640 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 HES5Q5TA89 166 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 RAET1LQ5VY80 246 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 H3F3CQ6NXT2 135 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 GPR148Q8TDV2 347 aa16.39■□□□□ 0.21
CCDC43-201ENST00000315286 OXGR1Q96P68 337 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms