RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
TRIM40-205ENST00000307859 CD96P40200 585 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 PPP5CP53041 499 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 BIDP55957 195 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 RPS11P62280 158 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM40-205ENST00000307859 RAC1P63000 192 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 OC90Q02509 493 aaPredicted RBP10.61□□□□□ -0.71
TRIM40-205ENST00000307859 GLO1Q04760 184 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 TRILQ7L0X0 811 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 HDDC2Q7Z4H3 204 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 FAM220AQ7Z4H9 259 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 TEX19Q8NA77 164 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 SLC26A10Q8NG04 563 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 AP3S1Q92572 193 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 OR2B2Q9GZK3 357 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 QPCTLQ9NXS2 382 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 LRFN1Q9P244 771 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 ABI3Q9P2A4 366 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 KCNG2Q9UJ96 466 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 B8ZZF3 427 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PSMD9O00233 223 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 ZNF593O00488 134 aaPredicted RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 CDK2AP1O14519 115 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 RRP8O43159 456 aaKnown RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 HLA-DQA2P01906 255 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PSMB10P40306 273 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 CASRP41180 1078 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 FMODQ06828 376 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 FOXO1Q12778 655 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PCK2Q16822 640 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 ACSM3Q53FZ2 586 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 LIPNQ5VXI9 398 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PAMR1Q6UXH9 720 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 NOXO1Q8NFA2 376 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 FNDC8Q8TC99 324 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 KCNE4Q8WWG9 221 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 KIAA1143Q96AT1 154 aaPredicted RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 OR8B4Q96RC9 309 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 AMELYQ99218 206 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 SH3GL3Q99963 347 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 UTP23Q9BRU9 249 aaKnown RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 RNF32Q9H0A6 362 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PPIL3Q9H2H8 161 aaKnown RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 RASD1Q9Y272 281 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 COA3Q9Y2R0 106 aaPredicted RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 KALRNO60229 2985 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PTPRQQ9UMZ3 2332 aa10.6□□□□□ -0.71
TRIM40-205ENST00000307859 NCOA6Q14686 2063 aaPredicted RBP10.6□□□□□ -0.71
TRIM40-205ENST00000307859 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 GJE1A6NN92 205 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 DNPH1O43598 174 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 EIF1BO60739 113 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 RAMP1O60894 148 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 KHDRBS3O75525 346 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 GATBO75879 557 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 HRGP04196 525 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 PGA4P0DJD7 388 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 PGA3P0DJD8 388 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ZNF12P17014 697 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 KLK2P20151 261 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 CFL1P23528 166 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ITGA3P26006 1051 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 CALRP27797 417 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 TNFSF8P32971 234 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 RPS27P42677 84 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 NANOS3P60323 173 aaKnown RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ADAM8P78325 824 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ROM1Q03395 351 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 POU4F3Q15319 338 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 TEX30Q5JUR7 227 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 TMEM225Q6GV28 225 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 SLC18B1Q6NT16 456 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 UNQ9370/PRO34162Q6UXP9 181 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 TPRA1Q86W33 373 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 PARP16Q8N5Y8 322 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 YIPF7Q8N8F6 280 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 OR6X1Q8NH79 312 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 SLC25A44Q96H78 314 aaPredicted RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 FAM173AQ9BQD7 235 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 TTYH2Q9BSA4 534 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 EMC6Q9BV81 110 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 ZFP64Q9NPA5 681 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 KLHL9Q9P2J3 617 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 BOKQ9UMX3 212 aaPredicted RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 CMAHPQ9Y471 501 aa10.59□□□□□ -0.71
TRIM40-205ENST00000307859 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
TRIM40-205ENST00000307859 IGKV1D-43A0A0B4J1Z2 117 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 TRAV1-2A0A0B4J238 106 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 A0A0J9YW62 118 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 SMIM30A4D0T7 59 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 IGHG1P01857 330 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 SPARCP09486 303 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 RFPL3SP0C7P2 107 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 LIPCP11150 499 aa10.58□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF43P17038 809 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms