RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Slc9a3r2Q9JHL1 337 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Znf346Q9R0B7 294 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Avpr1bQ9WU02 421 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Col5a1O88207 1838 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zfp534A2A7A1 661 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm9008E9PVG0 424 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm5916G5E8W5 102 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 RradO88667 308 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 MbpP04370 250 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Slc1a3P56564 543 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem171Q4KL18 322 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Clcn4Q61418 747 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1222Q7TR02 311 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ppp1r14dQ7TT52 146 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 SargQ8BI29 606 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 RbksQ8R1Q9 323 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ttc36Q8VBW8 186 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr486Q8VFD0 314 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Znf24Q91VN1 368 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tstd3Q9D0B5 157 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Aloxe3Q9WV07 711 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 TprF6ZDS4 2431 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Trbc1A0A0A6YWV4 173 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Trbv12-1A0A0B4J1H0 124 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 E030025P04RikA2A6V5 185 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Skint10A7TZG1 354 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 P01852 173 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Igh-1aP01865 398 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ighg1P01869 393 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Wnt4P22724 351 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Cers1P27545 350 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 S1pr2P52592 352 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Il9rQ01114 468 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Jmjd8Q3TA59 316 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Il17fQ7TNI7 161 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tas2r136Q7TQA8 305 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 TxnipQ8BG60 397 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Klhl26Q8BGY4 606 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 B4galt7Q8R087 327 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ube2fQ9CY34 185 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem176bQ9R1Q6 263 aa19.04■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 PrnA0A075B668 197 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zfp707F6QUN2 391 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm8888J3QPX5 126 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gpr50O88495 591 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Klrg1O88713 188 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 PkibQ04758 92 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem247Q497K7 211 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Sidt1Q6AXF6 827 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ldoc1Q7TPY9 151 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1282Q7TQY5 305 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Slc26a11Q80ZD3 593 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 ReltQ8BX43 436 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Pop4Q9CR08 221 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Isg20Q9JL16 300 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 PrndQ9QUG3 179 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ubqln2Q9QZM0 638 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Sptbn4E9PX29 2561 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Trbv20A0A0B4J1H5 111 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Fam136b-psA0A140T8T1 138 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1193A2AV13 318 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 4930522L14RikE9QAG4 666 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Adam10O35598 749 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Rad51dO55230 329 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gpd1P13707 349 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Rpl27P61358 136 aaKnown RBP19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Pate2Q3UW31 111 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 IppkQ6P1C1 489 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1135Q7TR42 310 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Znf8Q8BGV5 572 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Lsm14aQ8K2F8 462 aaKnown RBP19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r193Q8R258 319 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr807Q8VGI9 311 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Rprd1bQ9CSU0 326 aaKnown RBP19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Fbxl6Q9QXW0 535 aa19.03■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm21936A0A1Y7VJE9 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm5788A0A1Y7VK80 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm21904A8HG57 180 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Mrap2D3Z1Q2 207 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm21319F6YNI8 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm21866J3QMH4 180 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm5039J3QNT6 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cst3P21460 140 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cnr1P47746 473 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Tcl1aP56280 116 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gpr85P60894 370 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm2016Q3TQZ4 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Wdr75Q3U821 830 aaKnown RBP19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm8332Q3UTA4 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Nlrc3Q5DU56 1064 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Vmn1r196Q5SVD5 301 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 CfiQ61129 603 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Hsh2dQ6VYH9 334 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Slc35f2Q7TML3 375 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cpeb3Q7TN99 716 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm5662Q8BX20 144 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 TifabQ8JZM6 147 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Ces2cQ91WG0 561 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Ddah2Q99LD8 285 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gdpd3Q99LY2 330 aa19.02■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms