RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tp73Q9JJP2 631 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lamb1P02469 1786 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f16A0A087WSN2 498 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn2r113E9PZA6 856 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pon2Q62086 354 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Taf9Q8VI33 264 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 WacQ924H7 646 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 TsaccQ9DA44 124 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r9A2RST7 299 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nfatc1O88942 717 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rab3cP62823 227 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 DmwdQ08274 665 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sh3bgrl2Q8BG73 107 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 QpctlQ8BH73 383 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Q8K039 155 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrpl41Q9CQN7 135 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc22a21Q9WTN6 564 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Trav6-7-dv9A0A075B639 125 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Maml2F6U238 1170 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 RbpjP31266 526 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 ApodP51910 189 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fabp2P55050 132 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr506Q7TRU6 314 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Q91V76 315 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nkx6-1Q99MA9 365 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ap4m1Q9JKC7 449 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Acox1Q9R0H0 661 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tjp1P39447 1745 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rhox1B1APN4 224 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r58G3X9U3 310 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Shisa8J3QNX5 399 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r16K7N775 303 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sh2b3O09039 548 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pax6P63015 422 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Impad1Q80V26 356 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem184bQ8BG09 407 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ddah2Q99LD8 285 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mkrn2Q9ERV1 416 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wnk2Q3UH66 2149 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmed7D3YZZ5 224 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Otop2Q80SX5 563 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Coq4Q8BGB8 266 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 ScelQ9EQG3 652 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Spock2Q9ER58 423 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cbll1Q9JIY2 491 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Col3a1P08121 1464 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ighv16-1A0A0A6YW39 117 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 4930433I11RikA0A0U1RPT6 723 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plpp5Q3UMZ3 260 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 St8sia4Q64692 359 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd300lfQ6SJQ7 337 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sema6dQ76KF0 1073 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Bmt2Q8BXK4 403 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Med17Q8VCD5 649 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Senp8Q9D2Z4 221 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wnk3Q80XP9 1757 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1255A2AUA4 310 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rhox2cA2AWL9 191 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp160E9Q459 650 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rpl7P14148 270 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rce1P57791 329 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Dcaf7P61963 342 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rps25P62852 125 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fabp5Q05816 135 aaKnown RBP11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cr1lQ64735 483 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Znf516Q7TSH3 1157 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Katnb1Q8BG40 658 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp799Q8BHK4 648 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 JkampQ8BI36 311 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr360Q8VFP3 317 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Elovl7Q9D2Y9 281 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fam13cQ9DBR2 601 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Decr2Q9WV68 292 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mtcl1Q3UHU5 1945 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1082A0A1L1SUC9 313 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1076A2AK60 313 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nkx6-2D3Z4R4 277 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr739E9Q1P0 309 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 OpcmlG5E8G3 345 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tnfrsf1aP25118 454 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 4930480E11RikQ0VG34 394 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plk5Q4FZD7 595 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr323Q5NCD0 323 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cfap161Q6P8Y0 303 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Xkr8Q8C0T0 401 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Alg12Q8VDB2 486 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr368Q8VF22 327 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 P2ry14Q9ESG6 338 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr71Q9QZ18 312 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm11239E9Q5Z9 360 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm11237F2Z3W5 360 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm11238F2Z478 360 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd93O89103 644 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 CdaP56389 146 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ccdc106Q3ULM0 279 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm428Q3UTE2 360 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rnase11Q5GAM9 192 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Abhd17bQ7M759 288 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r201Q8R262 300 aa11.1□□□□□ -0.63
Trim56-201ENSMUST00000054384 Calhm2Q8VEC4 323 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms