RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CCDC124Q96CT7 223 aaKnown RBP9.46□□□□□ -0.9
NDEL1-208ENST00000580237 MS4A3Q96HJ5 214 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 RSRC1Q96IZ7 334 aaKnown RBP9.46□□□□□ -0.9
NDEL1-208ENST00000580237 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 ZNF570Q96NI8 536 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 SH3GL3Q99963 347 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 ALG12Q9BV10 488 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 DENND2DQ9H6A0 471 aaPredicted RBP9.46□□□□□ -0.9
NDEL1-208ENST00000580237 SMURF2Q9HAU4 748 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 CCNB1IP1Q9NPC3 277 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 DLL4Q9NR61 685 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 GRHPRQ9UBQ7 328 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 CD300AQ9UGN4 299 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 TMCC3Q9ULS5 477 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 FKBP7Q9Y680 259 aa9.46□□□□□ -0.9
NDEL1-208ENST00000580237 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.9
NDEL1-208ENST00000580237 AKAP9Q99996 3911 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 IQCMA0A1B0GVH7 501 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 H7C1C5 153 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 H7C417 338 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 CDC42EP2O14613 210 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 NDUFS7O75251 213 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 PDE5AO76074 875 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ERCC1P07992 297 aaPredicted RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 OR4A8P0C604 315 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 TSPAN19P0C672 248 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 PATE4P0C8F1 98 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 NPR2P20594 1047 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ATP6V1B2P21281 511 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 RIPPLY3P57055 190 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 RPS23P62266 143 aaKnown RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 LCN6P62502 163 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ERVK-25P63136 954 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 HSF2Q03933 536 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 PLP2Q04941 152 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 RAB39AQ14964 217 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ZBED5Q49AG3 693 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 LRFN4Q6PJG9 635 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 CLEC9AQ6UXN8 241 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 TMPRSS11FQ6ZWK6 438 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ZDHHC21Q8IVQ6 265 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 SKA3Q8IX90 412 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ARHGAP24Q8N264 748 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 LRRC18Q8N456 261 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 FANK1Q8TC84 345 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 BCAS4Q8TDM0 211 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 C7orf34Q96L11 122 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 TSPAN32Q96QS1 320 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 RBP7Q96R05 134 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 TNFRSF13CQ96RJ3 184 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 SEPHS2Q99611 448 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 VRK1Q99986 396 aaPredicted RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 MRPL13Q9BYD1 178 aaKnown RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 MUC13Q9H3R2 512 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ZNF442Q9H7R0 627 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 CDH20Q9HBT6 801 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 B3GNT2Q9NY97 397 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ADAM21Q9UKJ8 722 aa9.45□□□□□ -0.9
NDEL1-208ENST00000580237 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 PRPF19Q9UMS4 504 aaKnown RBP9.45□□□□□ -0.9
NDEL1-208ENST00000580237 TLN2Q9Y4G6 2542 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 B9A039 149 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 OR10H3O60404 316 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 NDUFB2O95178 105 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 PTHP01270 115 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 CD14P08571 375 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 ZNF14P17017 642 aaPredicted RBP9.44□□□□□ -0.9
NDEL1-208ENST00000580237 RRM2P31350 389 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 CDAP32320 146 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 THBS4P35443 961 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 IFNGR2P38484 337 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 MRPS34P82930 218 aaKnown RBP9.44□□□□□ -0.9
NDEL1-208ENST00000580237 TNK1Q13470 666 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
NDEL1-208ENST00000580237 ADIPOQQ15848 244 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 SGCAQ16586 387 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 HIST3H3Q16695 136 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 TBC1D28Q2M2D7 210 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 NRN1LQ496H8 165 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 MTX3Q5HYI7 312 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 C10orf128Q5T292 105 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 RINLQ6ZS11 566 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 TSEN54Q7Z6J9 526 aaKnown RBP9.44□□□□□ -0.9
NDEL1-208ENST00000580237 DHFR2Q86XF0 187 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 CIARTQ8N365 385 aaPredicted RBP9.44□□□□□ -0.9
NDEL1-208ENST00000580237 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 CLDN22Q8N7P3 220 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 SLC30A7Q8NEW0 376 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 ZNF519Q8TB69 540 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 SMR3AQ99954 134 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 RHNO1Q9BSD3 238 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 TRIM15Q9C019 465 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 LRMDAQ9H2I8 198 aa9.44□□□□□ -0.9
NDEL1-208ENST00000580237 OR51B6Q9H340 312 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms