RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 EXOGQ9Y2C4 368 aaKnown RBP14.27□□□□□ -0.13
SS18-211ENST00000578954 PHF3Q92576 2039 aaKnown RBP14.26□□□□□ -0.13
SS18-211ENST00000578954 IRGMA1A4Y4 181 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 RPL36A-HNRNPH2H7BZ11 118 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 MRPS14O60783 128 aaKnown RBP14.26□□□□□ -0.13
SS18-211ENST00000578954 UPK3AO75631 287 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 TNFSF13O75888 250 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 QDPRP09417 244 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 GLI4P10075 376 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 GAAP10253 952 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 EDNRAP25101 427 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 KIR2DL2P43627 348 aaPredicted RBP14.26□□□□□ -0.13
SS18-211ENST00000578954 OR3A2P47893 321 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 DBPQ10586 325 aaPredicted RBP14.26□□□□□ -0.13
SS18-211ENST00000578954 POU4F2Q12837 409 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 ETFDHQ16134 617 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 RPRMLQ8N4K4 120 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 POMGNT2Q8NAT1 580 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 ZNF540Q8NDQ6 660 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 PROKR2Q8NFJ6 384 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 APH1AQ96BI3 265 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 LGALS12Q96DT0 336 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 RNFT2Q96EX2 444 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 JAM3Q9BX67 310 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 FGF20Q9NP95 211 aaPredicted RBP14.26□□□□□ -0.13
SS18-211ENST00000578954 CCNB1IP1Q9NPC3 277 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 B3GAT2Q9NPZ5 323 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 MALT1Q9UDY8 824 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 TINAGQ9UJW2 476 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 EMC9Q9Y3B6 208 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 UGT2A1Q9Y4X1 527 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 IGSF10Q6WRI0 2623 aa14.26□□□□□ -0.13
SS18-211ENST00000578954 J3QRE1 110 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 DHHO43323 396 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 SMNDC1O75940 238 aaKnown RBP eCLIP14.25□□□□□ -0.13
SS18-211ENST00000578954 IL2RAP01589 272 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 HRGP04196 525 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 CA7P43166 264 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 RPS7P62081 194 aaKnown RBP14.25□□□□□ -0.13
SS18-211ENST00000578954 GLO1Q04760 184 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 KLHL22Q53GT1 634 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 TSPO2Q5TGU0 170 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 GCNT2Q8N0V5 402 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 GPR137CQ8N3F9 429 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 SLC26A10Q8NG04 563 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 OR51L1Q8NGJ5 315 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 ZMYND19Q96E35 227 aaPredicted RBP14.25□□□□□ -0.13
SS18-211ENST00000578954 DMRTA2Q96SC8 542 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 ULBP2Q9BZM5 246 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 ADGRL4Q9HBW9 690 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 SLC7A10Q9NS82 523 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 COA3Q9Y2R0 106 aaPredicted RBP14.25□□□□□ -0.13
SS18-211ENST00000578954 RP1L1Q8IWN7 2480 aaPredicted RBP14.25□□□□□ -0.13
SS18-211ENST00000578954 NBEAQ8NFP9 2946 aa14.25□□□□□ -0.13
SS18-211ENST00000578954 MAGEA13PA6NCF6 341 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 TRIM64CA6NLI5 447 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 E9PLN8 166 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 CNOT4O95628 575 aaKnown RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 IGHA1P01876 353 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 CDK1P06493 297 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 HTR1AP08908 422 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 SBK2P0C263 348 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 TMIGD3P0DMS9 266 aaPredicted RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 HSF2Q03933 536 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 FOXF2Q12947 444 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 KCNMB1Q16558 191 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 RNLSQ5VYX0 342 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 TFAP2EQ6VUC0 442 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 B3GLCTQ6Y288 498 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 AHSA2Q719I0 299 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 LINGO2Q7L985 606 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 GLB1L2Q8IW92 636 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 TIGD4Q8IY51 512 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 NAXEQ8NCW5 288 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 OR52I1Q8NGK6 324 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 OR6K6Q8NGW6 343 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 SGCDQ92629 289 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 BBC3Q96PG8 261 aaPredicted RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 ALKBH3Q96Q83 286 aaPredicted RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 VKORC1Q9BQB6 163 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 COPS4Q9BT78 406 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 SFXN3Q9BWM7 321 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 GPR35Q9HC97 309 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 MRPL22Q9NWU5 206 aaKnown RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 DIMT1Q9UNQ2 313 aaKnown RBP14.24□□□□□ -0.13
SS18-211ENST00000578954 FREM1Q5H8C1 2179 aa14.24□□□□□ -0.13
SS18-211ENST00000578954 FAM171A2A8MVW0 826 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 FADS2O95864 444 aaKnown RBP14.23□□□□□ -0.13
SS18-211ENST00000578954 IL18BPO95998 194 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 CGAP01215 116 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 STSP08842 583 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 ADRA2AP08913 450 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 DCKP27707 260 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 LAP3P28838 519 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 PER3P56645 1201 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 ST3GAL4Q11206 333 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 PCK2Q16822 640 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 NRN1LQ496H8 165 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 TEX30Q5JUR7 227 aa14.23□□□□□ -0.13
SS18-211ENST00000578954 FBXW9Q5XUX1 488 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms