RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CENPBD1B2RD01 187 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 H3BSA7 217 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 PRRG2O14669 202 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 MRPL3P09001 348 aaKnown RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 QDPRP09417 244 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 CRABP1P29762 137 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 PTGER4P35408 488 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 MVKQ03426 396 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 NEDD8Q15843 81 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 LRFN4Q6PJG9 635 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 DNM1P34Q6PK57 102 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 SEM1Q6ZVN7 128 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 OR4F15Q8NGB8 312 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 GP6Q9HCN6 339 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 CNOT2Q9NZN8 540 aaKnown RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 ZNF835Q9Y2P0 537 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 COA3Q9Y2R0 106 aaPredicted RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 CCDC160A6NGH7 325 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 SS18L1O75177 396 aaPredicted RBP21.27■■□□□ 1
ATPAF1-213ENST00000574428 UPK3AO75631 287 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 STSP08842 583 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 ADRA2AP08913 450 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 ST3GAL4Q11206 333 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 LCN1P1Q5VSP4 162 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 GPR141Q7Z602 305 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 DOLPP1Q86YN1 238 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 SPARTQ8N0X7 666 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 ZNF511Q8NB15 262 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 IPCEF1Q8WWN9 437 aaPredicted RBP21.27■■□□□ 1
ATPAF1-213ENST00000574428 RACGAP1Q9H0H5 632 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 PARPBPQ9NWS1 579 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 TINAGQ9UJW2 476 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 MOKQ9UQ07 419 aa21.27■■□□□ 1
ATPAF1-213ENST00000574428 IGHV3-9P01782 118 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 PIPP12273 146 aaPredicted RBP21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 ATP6V1E1P36543 226 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 RBPJQ06330 500 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 TMED1Q13445 227 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 OTPQ5XKR4 325 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 STX19Q8N4C7 294 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 OR52I1Q8NGK6 324 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 INTS12Q96CB8 462 aaKnown RBP21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 TM9SF2Q99805 663 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 CCDC90BQ9GZT6 254 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 C12orf49Q9H741 205 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 GLRX2Q9NS18 164 aa21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 MRPS18AQ9NVS2 196 aaKnown RBP21.26■□□□□ 0.99
ATPAF1-213ENST00000574428 MBD3L4A6NDZ8 208 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 MBD3L3A6NE82 208 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 TVP23AA6NH52 213 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 MBD3L5A6NJ08 208 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 KHDRBS3O75525 346 aaKnown RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 JUNBP17275 347 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SIRPAP78324 504 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 RAB40BQ12829 278 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 KLHL22Q53GT1 634 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 XAF1Q6GPH4 301 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SLC25A47Q6Q0C1 308 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 MBD3L2Q8NHZ7 208 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 FNDC8Q8TC99 324 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SMAP2Q8WU79 429 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 MYDGFQ969H8 173 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 ALKBH3Q96Q83 286 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 ULBP2Q9BZM5 246 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 TP63Q9H3D4 680 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 ADGRL4Q9HBW9 690 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 HAO2Q9NYQ3 351 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 COMMD3-BMI1R4GMX3 469 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 RGS10O43665 173 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SELENOFO60613 162 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 HLA-DQA2P01906 255 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 CDK1P06493 297 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 NR2C1P13056 603 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 C21orf33P30042 268 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 NAA10P41227 235 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 GGTLC2Q14390 218 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 RAB39AQ14964 217 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 GUSBP1Q15486 140 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 OR2A2Q6IF42 318 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 B3GNT6Q6ZMB0 384 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 MED12LQ86YW9 2145 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 GPR137CQ8N3F9 429 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 APH1AQ96BI3 265 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SLCO5A1Q9H2Y9 848 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 SH3BGRL2Q9UJC5 107 aa21.25■□□□□ 0.99
ATPAF1-213ENST00000574428 IGSF10Q6WRI0 2623 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 MT-ND2P03891 347 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 GLO1Q04760 184 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 TSPO2Q5TGU0 170 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 LINGO2Q7L985 606 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 ZNF100Q8IYN0 542 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 CNN2Q99439 309 aaKnown RBP21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 VCX3AQ9NNX9 186 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 CCNB1IP1Q9NPC3 277 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 TAS2R16Q9NYV7 291 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 EXOGQ9Y2C4 368 aaKnown RBP21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 SNX5Q9Y5X3 404 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 CACNA1BQ00975 2339 aa21.24■□□□□ 0.99
ATPAF1-213ENST00000574428 A0A1W2PPL8 197 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms