RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SPEF1Q9Y4P9 236 aa12.49□□□□□ -0.41
CMTM3-215ENST00000568477 ATRQ13535 2644 aa12.49□□□□□ -0.41
CMTM3-215ENST00000568477 GSTA4O15217 222 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 GPRIN2O60269 458 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 CRLF1O75462 422 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 FARS2O95363 451 aaKnown RBP12.48□□□□□ -0.41
CMTM3-215ENST00000568477 ERCC1P07992 297 aaPredicted RBP12.48□□□□□ -0.41
CMTM3-215ENST00000568477 QDPRP09417 244 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 NR4A1P22736 598 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 AQP2P41181 271 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 SLC34A1Q06495 639 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 FLOT2Q14254 428 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 RCN1Q15293 331 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 CARTPTQ16568 116 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 ASB10Q8WXI3 467 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 ZNF75AQ96N20 296 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 MUC13Q9H3R2 512 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 MYOZ1Q9NP98 299 aaPredicted RBP12.48□□□□□ -0.41
CMTM3-215ENST00000568477 GMPR2Q9P2T1 348 aaKnown RBP12.48□□□□□ -0.41
CMTM3-215ENST00000568477 A4GNTQ9UNA3 340 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 CMAHPQ9Y471 501 aa12.48□□□□□ -0.41
CMTM3-215ENST00000568477 HTR3EA5X5Y0 456 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 NDUFS8O00217 210 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 CXCR6O00574 342 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 NME4O00746 187 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 PIP5K1CO60331 668 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 ZNF682O95780 498 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 IFNW1P05000 195 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
CMTM3-215ENST00000568477 ZNF84P51523 738 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 RPS23P62266 143 aaKnown RBP12.47□□□□□ -0.41
CMTM3-215ENST00000568477 VLDLRP98155 873 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 MS4A2Q01362 244 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 GALK2Q01415 458 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 RAB39AQ14964 217 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 ZFP1Q6P2D0 407 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 OFCC1Q8IZS5 231 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 SYT14Q8NB59 555 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 MOSPD2Q8NHP6 518 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 GEMIN6Q8WXD5 167 aaKnown RBP12.47□□□□□ -0.41
CMTM3-215ENST00000568477 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 ZNF347Q96SE7 839 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 DOK1Q99704 481 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 FNDC11Q9BVV2 318 aa12.47□□□□□ -0.41
CMTM3-215ENST00000568477 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 LOC390937A0A1W2PQ73 354 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 NPIPB13A6NJU9 1138 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 A8MV72 311 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 NPIPB4C9JG80 1138 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 TRMUO75648 421 aaKnown RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 STAMBPO95630 424 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 SERPINA5P05154 406 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 TSPAN19P0C672 248 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 IFI30P13284 250 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 ZNF35P13682 527 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 ANPEPP15144 967 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 ACADSP16219 412 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 YAP1P46937 504 aaKnown RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 GSK3BP49841 420 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 MYBPC1Q00872 1141 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 RUNX1T1Q06455 604 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 TRAM2Q15035 370 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 HIST3H3Q16695 136 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 IFI44LQ53G44 452 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 TMEM53Q6P2H8 277 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 CDK20Q8IZL9 346 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 RNF148Q8N7C7 305 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 OR4K5Q8NGD3 323 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 NEU4Q8WWR8 484 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 BPIFA2Q96DR5 249 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 KCTD14Q9BQ13 255 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 MRPL13Q9BYD1 178 aaKnown RBP12.46□□□□□ -0.41
CMTM3-215ENST00000568477 RNF121Q9H920 327 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 HIF3AQ9Y2N7 669 aa12.46□□□□□ -0.41
CMTM3-215ENST00000568477 TMEM129A0AVI4 362 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 SH3PXD2BA1X283 911 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 NR2C1P13056 603 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 GLRXP35754 106 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 NR4A2P43354 598 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 GGTLC2Q14390 218 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 TAF11Q15544 211 aa12.45□□□□□ -0.42
CMTM3-215ENST00000568477 SLC36A2Q495M3 483 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms