RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 DGCR6Q14129 220 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 ANKDD1AQ495B1 522 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 TMPRSS11FQ6ZWK6 438 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 NSMAFQ92636 917 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 FAM46AQ96IP4 442 aaKnown RBP26.61■■□□□ 1.85
CMTM4-204ENST00000563952 RNF121Q9H920 327 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 FBXL3Q9UKT7 428 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 TMEM5Q9Y2B1 443 aa26.61■■□□□ 1.85
CMTM4-204ENST00000563952 SETD2Q9BYW2 2564 aaPredicted RBP26.6■■□□□ 1.85
CMTM4-204ENST00000563952 C2CD3Q4AC94 2353 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 PDE5AO76074 875 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 IGHMP01871 453 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 RPL4P36578 427 aaKnown RBP26.6■■□□□ 1.85
CMTM4-204ENST00000563952 C10orf128Q5T292 105 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 SLC16A14Q7RTX9 510 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 MAPK1IP1LQ8NDC0 245 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 OR52J3Q8NH60 311 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 NSL1Q96IY1 281 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 TSPAN32Q96QS1 320 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 KCNK17Q96T54 332 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 ZNF442Q9H7R0 627 aa26.6■■□□□ 1.85
CMTM4-204ENST00000563952 TRBV4-1A0A0J9YWV2 114 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 VSTM5A8MXK1 200 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 B2RBV5 119 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 B9A039 149 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 HEXAP06865 529 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 ITGA2P17301 1181 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 NPR2P20594 1047 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 TMEM53Q6P2H8 277 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 DNM1P46Q6ZS02 220 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 LRRC18Q8N456 261 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 CLDN22Q8N7P3 220 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 REG4Q9BYZ8 158 aa26.59■■□□□ 1.85
CMTM4-204ENST00000563952 NR2C1P13056 603 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ZNF35P13682 527 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 NR4A1P22736 598 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 CDAP32320 146 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ZNF133P52736 654 aaPredicted RBP26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ERVK-25P63136 954 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 EFNB3Q15768 340 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 SLC36A2Q495M3 483 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ZBED5Q49AG3 693 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 FAM205BPQ63HN1 556 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 MCUR1Q96AQ8 359 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 NMD3Q96D46 503 aaKnown RBP26.58■■□□□ 1.85
CMTM4-204ENST00000563952 VRK1Q99986 396 aaPredicted RBP26.58■■□□□ 1.85
CMTM4-204ENST00000563952 RHNO1Q9BSD3 238 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ALG12Q9BV10 488 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 SMURF2Q9HAU4 748 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 SPEF1Q9Y4P9 236 aa26.58■■□□□ 1.85
CMTM4-204ENST00000563952 ARFGEF3Q5TH69 2177 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 IGKV1D-43A0A0B4J1Z2 117 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 A6NIZ1 184 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 SEMG1P04279 462 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 EFNA4P52798 201 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 RAP1BP61224 184 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 RAP1AP62834 184 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 SEC23BQ15437 767 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 SPATS1Q496A3 300 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 NRN1LQ496H8 165 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 CLEC2AQ6UVW9 174 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 DPPA2Q7Z7J5 298 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 ZNF584Q8IVC4 421 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 ZNF525Q8N782 197 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 ZNF519Q8TB69 540 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 RBP7Q96R05 134 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 PLK3Q9H4B4 646 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 UGT2A1Q9Y4X1 527 aa26.57■■□□□ 1.84
CMTM4-204ENST00000563952 LY6HO94772 140 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 SERPINA5P05154 406 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 GALK2Q01415 458 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 SPIBQ01892 262 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 IQCCQ4KMZ1 466 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 SVOPLQ8N434 492 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 DHRS1Q96LJ7 313 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 NDEL1Q9GZM8 345 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 KRCC1Q9NPI7 259 aaPredicted RBP26.56■■□□□ 1.84
CMTM4-204ENST00000563952 AURKCQ9UQB9 309 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 ADAM18Q9Y3Q7 739 aa26.56■■□□□ 1.84
CMTM4-204ENST00000563952 ZNF26P17031 533 aaPredicted RBP26.55■■□□□ 1.84
CMTM4-204ENST00000563952 MRPS34P82930 218 aaKnown RBP26.55■■□□□ 1.84
CMTM4-204ENST00000563952 SGCAQ16586 387 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 THEM4Q5T1C6 240 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 SLC25A47Q6Q0C1 308 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 SORCS2Q96PQ0 1159 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 KCNN2Q9H2S1 579 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 SIAEQ9HAT2 523 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 GRHPRQ9UBQ7 328 aa26.55■■□□□ 1.84
CMTM4-204ENST00000563952 IGHV4-30-2A0A087WSY4 118 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 H7C1C5 153 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 GPRIN2O60269 458 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 GADD45GO95257 159 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 FABP3P05413 133 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 CD14P08571 375 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 OMPP47874 163 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 LIMS1P48059 325 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 SMIM11AP58511 58 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 DSCR9P59020 149 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 LCN6P62502 163 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 CYP2R1Q6VVX0 501 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms