RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MYCBPQ99417 103 aaPredicted RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 UBTD1Q9HAC8 227 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 C8orf4Q9NR00 106 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 IL20Q9NYY1 176 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ADAM18Q9Y3Q7 739 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 RNF115Q9Y4L5 304 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 TIMM10BQ9Y5J6 103 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZFYVE26Q68DK2 2539 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZZEF1O43149 2961 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 EXPH5Q8NEV8 1989 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 SHANK1Q9Y566 2161 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 ZNF462Q96JM2 2506 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 A0A1W2PR80 420 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 ITGA5P08648 1049 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 CBR1P16152 277 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 CCNOP22674 350 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 GRK5P34947 590 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 GDI2P50395 445 aaKnown RBP9.4□□□□□ -0.9
TPM1-229ENST00000561242 IST1P53990 364 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 CRISP1P54107 249 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 CDC42P60953 191 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 LSM11P83369 360 aaKnown RBP eCLIP9.4□□□□□ -0.9
TPM1-229ENST00000561242 MOGQ16653 247 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 TBC1D28Q2M2D7 210 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 IQCCQ4KMZ1 466 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 KLHL12Q53G59 568 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 LCN1P1Q5VSP4 162 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 FBXL14Q8N1E6 418 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 OR6K6Q8NGW6 343 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 HDAC2Q92769 488 aaKnown RBP9.4□□□□□ -0.9
TPM1-229ENST00000561242 BCL2L2Q92843 193 aaPredicted RBP9.4□□□□□ -0.9
TPM1-229ENST00000561242 RASD2Q96D21 266 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 NMNAT3Q96T66 252 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 SYT4Q9H2B2 425 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 RPRD1BQ9NQG5 326 aaKnown RBP9.4□□□□□ -0.9
TPM1-229ENST00000561242 RASSF1Q9NS23 344 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 TMEM38BQ9NVV0 291 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 TVP23BQ9NYZ1 205 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 FBXO9Q9UK97 447 aaPredicted RBP9.4□□□□□ -0.9
TPM1-229ENST00000561242 OAZ3Q9UMX2 235 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 EML6Q6ZMW3 1958 aa9.4□□□□□ -0.9
TPM1-229ENST00000561242 ARPC4-TTLL3A0A0A6YYG9 625 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 H7C1C5 153 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 ABCD4O14678 606 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 SEC14L2O76054 403 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 SLC2A10O95528 541 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 MT-ND5P03915 603 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 HIST1H1CP16403 213 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 RAD52P43351 418 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 GIPRP48546 466 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 IDH3GP51553 393 aaPredicted RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 RPS23P62266 143 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 LCN6P62502 163 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 MRPS34P82930 218 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 PGGHGQ32M88 737 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 ZGRF1Q86YA3 2104 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 PQLC1Q8N2U9 271 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 SDR9C7Q8NEX9 313 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 UTP4Q969X6 686 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 SLCO4A1Q96BD0 722 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 SNX18Q96RF0 628 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 SH3GL3Q99963 347 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 NDRG4Q9ULP0 352 aaKnown RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 MOKQ9UQ07 419 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 COA3Q9Y2R0 106 aaPredicted RBP9.39□□□□□ -0.91
TPM1-229ENST00000561242 FKBP7Q9Y680 259 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 ZNF407Q9C0G0 2248 aa9.39□□□□□ -0.91
TPM1-229ENST00000561242 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
TPM1-229ENST00000561242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.38□□□□□ -0.91
TPM1-229ENST00000561242 KLF4O43474 513 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 TXNDC12O95881 172 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 HLA-HP01893 362 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 CST2P09228 141 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 TSPAN19P0C672 248 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 CD40P25942 277 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 NTF4P34130 210 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 FABP6P51161 128 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 CDH11P55287 796 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 ADAM8P78325 824 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 RCN1Q15293 331 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 TRIP10Q15642 601 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 C10orf128Q5T292 105 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 ZNF704Q6ZNC4 412 aaPredicted RBP9.38□□□□□ -0.91
TPM1-229ENST00000561242 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms