RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 NCCRP1Q6ZVX7 275 aaPredicted RBP15.1■□□□□ 0.01
LDLR-206ENST00000557958 DPY19L4Q7Z388 723 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 UEVLDQ8IX04 471 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 ZNF454Q8N9F8 522 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 RELTQ969Z4 430 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 ABCB9Q9NP78 766 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 QPCTLQ9NXS2 382 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 ZNF281Q9Y2X9 895 aa15.1■□□□□ 0.01
LDLR-206ENST00000557958 FREM2Q5SZK8 3169 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 TRAV1-2A0A0B4J238 106 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 MAGEB4O15481 346 aaPredicted RBP15.09■□□□□ 0.01
LDLR-206ENST00000557958 HLA-DOBP13765 273 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 TCEA1P23193 301 aaKnown RBP15.09■□□□□ 0.01
LDLR-206ENST00000557958 CDC20Q12834 499 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 ZMAT1Q5H9K5 638 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 RAET1LQ5VY80 246 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 HBMQ6B0K9 141 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 ZNF544Q6NX49 715 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 KCTD18Q6PI47 426 aaPredicted RBP15.09■□□□□ 0.01
LDLR-206ENST00000557958 RPS4Y2Q8TD47 263 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 THEM6Q8WUY1 208 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 NTNG2Q96CW9 530 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 DIRAS2Q96HU8 199 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 JSRP1Q96MG2 331 aaPredicted RBP15.09■□□□□ 0.01
LDLR-206ENST00000557958 TMEM185BQ9H7F4 350 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 SP140LQ9H930 580 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 ANKRD10Q9NXR5 420 aa15.09■□□□□ 0.01
LDLR-206ENST00000557958 GJE1A6NN92 205 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 ZNF593O00488 134 aaPredicted RBP15.08■□□□□ 0.01
LDLR-206ENST00000557958 SLC19A2O60779 497 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 OR8G3PP0DMU2 310 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 CTLA4P16410 223 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 ITGA3P26006 1051 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 MAPK3P27361 379 aaPredicted RBP15.08■□□□□ 0.01
LDLR-206ENST00000557958 PSMB10P40306 273 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 ADAM8P78325 824 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 RTP5Q14D33 572 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 TMEM176BQ3YBM2 270 aaPredicted RBP15.08■□□□□ 0.01
LDLR-206ENST00000557958 LYSMD2Q8IV50 215 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 KDM8Q8N371 416 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 MIB2Q96AX9 1013 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 KCNK17Q96T54 332 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 PIGQQ9BRB3 760 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 ABI3Q9P2A4 366 aa15.08■□□□□ 0.01
LDLR-206ENST00000557958 MRM2Q9UI43 246 aaKnown RBP15.08■□□□□ 0.01
LDLR-206ENST00000557958 PCNX3Q9H6A9 2034 aa15.08■□□□□ 0
LDLR-206ENST00000557958 SMIM30A4D0T7 59 aa15.08■□□□□ 0
LDLR-206ENST00000557958 SULT2B1O00204 365 aa15.08■□□□□ 0
LDLR-206ENST00000557958 ZNF432O94892 652 aa15.08■□□□□ 0
LDLR-206ENST00000557958 PMS2P2O95744 297 aa15.08■□□□□ 0
LDLR-206ENST00000557958 SFTPDP35247 375 aa15.08■□□□□ 0
LDLR-206ENST00000557958 CYB561P49447 251 aa15.08■□□□□ 0
LDLR-206ENST00000557958 RASGEF1BQ0VAM2 473 aa15.08■□□□□ 0
LDLR-206ENST00000557958 LIPNQ5VXI9 398 aa15.08■□□□□ 0
LDLR-206ENST00000557958 TMEM225Q6GV28 225 aa15.08■□□□□ 0
LDLR-206ENST00000557958 CADM3Q8N126 398 aa15.08■□□□□ 0
LDLR-206ENST00000557958 ADAMTS17Q8TE56 1095 aa15.08■□□□□ 0
LDLR-206ENST00000557958 THRSPQ92748 146 aa15.08■□□□□ 0
LDLR-206ENST00000557958 RBP7Q96R05 134 aa15.08■□□□□ 0
LDLR-206ENST00000557958 ATF6BQ99941 703 aa15.08■□□□□ 0
LDLR-206ENST00000557958 SCNM1Q9BWG6 230 aa15.08■□□□□ 0
LDLR-206ENST00000557958 COMMD4Q9H0A8 199 aa15.08■□□□□ 0
LDLR-206ENST00000557958 COMMD3Q9UBI1 195 aa15.08■□□□□ 0
LDLR-206ENST00000557958 CEP250Q9BV73 2442 aa15.07■□□□□ 0
LDLR-206ENST00000557958 ARPC4-TTLL3A0A0A6YYG9 625 aa15.07■□□□□ 0
LDLR-206ENST00000557958 NKX2-8O15522 239 aa15.07■□□□□ 0
LDLR-206ENST00000557958 EIF1BO60739 113 aaKnown RBP15.07■□□□□ 0
LDLR-206ENST00000557958 KHDRBS3O75525 346 aaKnown RBP15.07■□□□□ 0
LDLR-206ENST00000557958 RPP14O95059 124 aaKnown RBP15.07■□□□□ 0
LDLR-206ENST00000557958 F10P00742 488 aa15.07■□□□□ 0
LDLR-206ENST00000557958 UCHL1P09936 223 aa15.07■□□□□ 0
LDLR-206ENST00000557958 NR2C1P13056 603 aa15.07■□□□□ 0
LDLR-206ENST00000557958 ZNF823P16415 610 aa15.07■□□□□ 0
LDLR-206ENST00000557958 SHC1P29353 583 aa15.07■□□□□ 0
LDLR-206ENST00000557958 CASRP41180 1078 aa15.07■□□□□ 0
LDLR-206ENST00000557958 CAV3P56539 151 aa15.07■□□□□ 0
LDLR-206ENST00000557958 ALKBH1Q13686 389 aaKnown RBP15.07■□□□□ 0
LDLR-206ENST00000557958 ZNF239Q16600 458 aaKnown RBP15.07■□□□□ 0
LDLR-206ENST00000557958 DCAF10Q5QP82 559 aa15.07■□□□□ 0
LDLR-206ENST00000557958 IGF2-ASQ6U949 168 aa15.07■□□□□ 0
LDLR-206ENST00000557958 FAM131AQ6UXB0 335 aa15.07■□□□□ 0
LDLR-206ENST00000557958 TMPPEQ6ZT21 453 aa15.07■□□□□ 0
LDLR-206ENST00000557958 SNX29P2Q8IUI4 249 aa15.07■□□□□ 0
LDLR-206ENST00000557958 OR5M1Q8NGP8 315 aa15.07■□□□□ 0
LDLR-206ENST00000557958 OR5AK2Q8NH90 309 aa15.07■□□□□ 0
LDLR-206ENST00000557958 NSMAFQ92636 917 aa15.07■□□□□ 0
LDLR-206ENST00000557958 OXGR1Q96P68 337 aa15.07■□□□□ 0
LDLR-206ENST00000557958 GNRHR2Q96P88 292 aa15.07■□□□□ 0
LDLR-206ENST00000557958 MFRPQ9BY79 579 aa15.07■□□□□ 0
LDLR-206ENST00000557958 TSPAN10Q9H1Z9 355 aaPredicted RBP15.07■□□□□ 0
LDLR-206ENST00000557958 PROK2Q9HC23 129 aa15.07■□□□□ 0
LDLR-206ENST00000557958 KLHDC2Q9Y2U9 406 aa15.07■□□□□ 0
LDLR-206ENST00000557958 V9GYH0 126 aa15.07■□□□□ 0
LDLR-206ENST00000557958 AHCTF1Q8WYP5 2266 aa15.07■□□□□ 0
LDLR-206ENST00000557958 LOC102725191A0A1B0GVB3 256 aa15.06■□□□□ 0
LDLR-206ENST00000557958 A0A1W2PNR3 127 aa15.06■□□□□ 0
LDLR-206ENST00000557958 SHISA3A0PJX4 238 aa15.06■□□□□ 0
LDLR-206ENST00000557958 FABP12A6NFH5 140 aa15.06■□□□□ 0
LDLR-206ENST00000557958 ARGFXA6NJG6 315 aa15.06■□□□□ 0
LDLR-206ENST00000557958 A6NL46 340 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms