RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 JAZF1Q86VZ6 243 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 ATG16L2Q8NAA4 619 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 NSMAFQ92636 917 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 RASD2Q96D21 266 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 LURAP1Q96LR2 239 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 C1QTNF6Q9BXI9 259 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 KCNN2Q9H2S1 579 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 NPAP1Q9NZP6 1156 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 RNF115Q9Y4L5 304 aa17.32■□□□□ 0.36
CHEK1-215ENST00000533778 UNC79Q9P2D8 2635 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 DPRXA6NFQ7 191 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 G3V2T6 193 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 UBL3O95164 117 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 CBR1P16152 277 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 CD40P25942 277 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 LOXP28300 417 aaPredicted RBP17.31■□□□□ 0.36
CHEK1-215ENST00000533778 MRPS34P82930 218 aaKnown RBP17.31■□□□□ 0.36
CHEK1-215ENST00000533778 BSPH1Q075Z2 132 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 CLEC12AQ5QGZ9 265 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 ZDHHC13Q8IUH4 622 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 DEPDC4Q8N2C3 294 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 OR2T33Q8NG76 320 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 TEX47Q8TBZ9 253 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 PYDC1Q8WXC3 89 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 LRTOMTQ8WZ04 291 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 CENPNQ96H22 339 aaPredicted RBP17.31■□□□□ 0.36
CHEK1-215ENST00000533778 HS3ST6Q96QI5 342 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 SNX18Q96RF0 628 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 TMEM204Q9BSN7 226 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 TSSK6Q9BXA6 273 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 SIAEQ9HAT2 523 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 VSX1Q9NZR4 365 aaPredicted RBP17.31■□□□□ 0.36
CHEK1-215ENST00000533778 KIF17Q9P2E2 1029 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 FBXL3Q9UKT7 428 aa17.31■□□□□ 0.36
CHEK1-215ENST00000533778 H3BN98 237 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 H7C1C5 153 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 RENP00797 406 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 CD79AP11912 226 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 PRKACGP22612 351 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 CRABP1P29762 137 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 KRTAP10-9P60411 292 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 LCN6P62502 163 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 FMODQ06828 376 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 GSG1Q2KHT4 349 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 SLC36A2Q495M3 483 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 DNM1P34Q6PK57 102 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 ZNF704Q6ZNC4 412 aaPredicted RBP17.3■□□□□ 0.36
CHEK1-215ENST00000533778 HS3ST5Q8IZT8 346 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 SVOPLQ8N434 492 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 CRNNQ9UBG3 495 aaPredicted RBP17.3■□□□□ 0.36
CHEK1-215ENST00000533778 CELSR2Q9HCU4 2923 aa17.3■□□□□ 0.36
CHEK1-215ENST00000533778 BHLHE40O14503 412 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 KHDRBS3O75525 346 aaKnown RBP17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SOX14O95416 240 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 HLA-HP01893 362 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 ZNF23P17027 643 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 CDKN2AP42771 156 aaKnown RBP17.29■□□□□ 0.36
CHEK1-215ENST00000533778 TUBA1BP68363 451 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 TUBA4AP68366 448 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 LEG1Q6P5S2 330 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 TUBA1AQ71U36 451 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SLC16A14Q7RTX9 510 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 AMIGO2Q86SJ2 522 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SKA3Q8IX90 412 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 LNX2Q8N448 690 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SLC38A2Q96QD8 506 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 KCNS3Q9BQ31 491 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 PLA2G12AQ9BZM1 189 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SYT4Q9H2B2 425 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 PLEKHF2Q9H8W4 249 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 SEC61A2Q9H9S3 476 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 B3GNT2Q9NY97 397 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 UGT2A1Q9Y4X1 527 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 CRYBG3Q68DQ2 2970 aa17.29■□□□□ 0.36
CHEK1-215ENST00000533778 IGKV1D-43A0A0B4J1Z2 117 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 ABCD4O14678 606 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 SLC16A7O60669 478 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 RAB36O95755 333 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 IGKV3-15P01624 115 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 IGLV1-44P01699 117 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 OSMP13725 252 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 HIST1H1CP16403 213 aaKnown RBP17.28■□□□□ 0.36
CHEK1-215ENST00000533778 RAB1AP62820 205 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 SGCAQ16586 387 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 SLC36A3Q495N2 470 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 ADAM5Q6NVV9 412 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 PTCHD4Q6ZW05 846 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 MDP1Q86V88 176 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
CHEK1-215ENST00000533778 IL17RDQ8NFM7 739 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 OR52E2Q8NGJ4 325 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 OR8D4Q8NGM9 314 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 OR4K13Q8NH42 304 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 NMNAT3Q96T66 252 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 SH3GL3Q99963 347 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 TEX12Q9BXU0 123 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 PAPOLBQ9NRJ5 636 aaKnown RBP17.28■□□□□ 0.36
CHEK1-215ENST00000533778 REV1Q9UBZ9 1251 aa17.28■□□□□ 0.36
CHEK1-215ENST00000533778 IGHV1-18A0A0C4DH31 117 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms