RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 LUZP2Q86TE4 346 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 ZBTB46Q86UZ6 589 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 OR9Q1Q8NGQ5 310 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 RHOXF1Q8NHV9 184 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 TMEM163Q8TC26 289 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 FNDC8Q8TC99 324 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 ZNRF4Q8WWF5 429 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 TRUB1Q8WWH5 349 aaKnown RBP10.49□□□□□ -0.73
COMMD9-208ENST00000533643 MUS81Q96NY9 551 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF184Q99676 751 aaPredicted RBP10.49□□□□□ -0.73
COMMD9-208ENST00000533643 RERGLQ9H628 205 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 ASB6Q9NWX5 421 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 IMPAD1Q9NX62 359 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 AASSQ9UDR5 926 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 B9D1Q9UPM9 204 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 UGT2A1Q9Y4X1 527 aa10.49□□□□□ -0.73
COMMD9-208ENST00000533643 INTS1Q8N201 2190 aaKnown RBP10.49□□□□□ -0.73
COMMD9-208ENST00000533643 FAM90A27PA6NNH2 459 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 KHDRBS3O75525 346 aaKnown RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 GYPBP06028 91 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ITGA5P08648 1049 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 CLUP10909 449 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 NR2C1P13056 603 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 SPI1P17947 270 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 GABRB1P18505 474 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 COX5AP20674 150 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 AGAP20933 346 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 PAICSP22234 425 aaKnown RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 IGHV1-2P23083 117 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 CRABP1P29762 137 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 PYCR1P32322 319 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ARF1P84077 181 aaKnown RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 SRSF1Q07955 248 aaKnown RBP eCLIP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 IL18R1Q13478 541 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 P2RY6Q15077 328 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 STK11Q15831 433 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 C9orf135Q5VTT2 229 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 AADACL4Q5VUY2 407 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 XKRXQ6PP77 449 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ABHD12BQ7Z5M8 362 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 BCDIN3DQ7Z5W3 292 aaKnown RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 CXorf67Q86X51 503 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ENTHD1Q8IYW4 607 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF808Q8N4W9 903 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 FAM26EQ8N5C1 309 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 BBS1Q8NFJ9 593 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 OR8J1Q8NGP2 316 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 NSMAFQ92636 917 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 OTULINQ96BN8 352 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 APOL4Q9BPW4 351 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 RBM24Q9BX46 236 aaKnown RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 RASSF1Q9NS23 344 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 COA3Q9Y2R0 106 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 FKBP7Q9Y680 259 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 PCNX1Q96RV3 2341 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 NCOA6Q14686 2063 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-208ENST00000533643 FREM1Q5H8C1 2179 aa10.48□□□□□ -0.73
COMMD9-208ENST00000533643 NKX2-6A6NCS4 301 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 WIPF3A6NGB9 483 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 FAM171A2A8MVW0 826 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 GPANK1O95872 356 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 SLC2A5P22732 501 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 ASCL1P50553 236 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF84P51523 738 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 ISL1P61371 349 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 IL5RAQ01344 420 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 SLC25A30Q5SVS4 291 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 DNM1P34Q6PK57 102 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 STAC2Q6ZMT1 411 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 GLB1L2Q8IW92 636 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 OR2T4Q8NH00 348 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 CA5BP1Q8WTZ4 195 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 FOXN4Q96NZ1 517 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 RACGAP1Q9H0H5 632 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 OR51V1Q9H2C8 321 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 KCNJ16Q9NPI9 418 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 GALNT8Q9NY28 637 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 ELOVL5Q9NYP7 299 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 DNAJC27Q9NZQ0 273 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 RAB26Q9ULW5 256 aa10.47□□□□□ -0.73
COMMD9-208ENST00000533643 USP9XQ93008 2570 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CLEC18AA5D8T8 446 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CCDC182A6NF36 153 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF99A8MXY4 864 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 MPZL2O60487 215 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ENTPD6O75354 484 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 LYZL6O75951 148 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 AGFG2O95081 481 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 SCG5P05408 212 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 RNF224P0DH78 156 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 MYF6P23409 242 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 LAP3P28838 519 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CDAP32320 146 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CD79BP40259 229 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CENPAP49450 140 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms