RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 FNDC8Q8TC99 324 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 S100PBPQ96BU1 408 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 TSSK2Q96PF2 358 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 HDHD5Q9BXW7 423 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 PRRG3Q9BZD7 231 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 ACTR6Q9GZN1 396 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 NUAK2Q9H093 628 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 SLC25A19Q9HC21 320 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 NPDC1Q9NQX5 325 aaPredicted RBP15.35■□□□□ 0.05
NXF1-216ENST00000533499 GPR52Q9Y2T5 361 aa15.35■□□□□ 0.05
NXF1-216ENST00000533499 IGKV1D-43A0A0B4J1Z2 117 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 OR6C68A6NDL8 312 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 FAM183AA6NL82 134 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 FAM171A2A8MVW0 826 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 M0R129 80 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 CASQ2O14958 399 aaPredicted RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 KHDRBS3O75525 346 aaKnown RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 CLDN1O95832 211 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 COX5AP20674 150 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 TFF3Q07654 80 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 RIPK1Q13546 671 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 ETFDHQ16134 617 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 HIKESHIQ53FT3 197 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 OGFRL1Q5TC84 451 aaPredicted RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 DNM1P34Q6PK57 102 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 KLHL24Q6TFL4 600 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 OR1K1Q8NGR3 316 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 OR52N5Q8NH56 324 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 FOXB1Q99853 325 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 MED18Q9BUE0 208 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 GABARAPL3Q9BY60 117 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 GRIP2Q9C0E4 1043 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 MED20Q9H944 212 aa15.34■□□□□ 0.05
NXF1-216ENST00000533499 SMPD3Q9NY59 655 aaPredicted RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 VSX1Q9NZR4 365 aaPredicted RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 SPTAN1Q13813 2472 aaKnown RBP15.34■□□□□ 0.05
NXF1-216ENST00000533499 TUBAL3A6NHL2 446 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 ZNF99A8MXY4 864 aaPredicted RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 RPL36A-HNRNPH2H7BZ11 118 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 CTLA4P16410 223 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 PSMB1P20618 241 aaKnown RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 PAICSP22234 425 aaKnown RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 CDAP32320 146 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 PYCR1P32322 319 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 SH3BGRP55822 239 aaPredicted RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 UBE2NP61088 152 aaKnown RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 TUBA1BP68363 451 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 TUBA4AP68366 448 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 GABRA6Q16445 453 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 HIST3H3Q16695 136 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 OR7E24Q6IFN5 339 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 PLBD1Q6P4A8 553 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 SLC25A47Q6Q0C1 308 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 MEX3BQ6ZN04 569 aaKnown RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 TUBA1AQ71U36 451 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 WFDC8Q8IUA0 241 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 PACRGLQ8N7B6 248 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 ZNF555Q8NEP9 628 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 PROKR2Q8NFJ6 384 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 OR51L1Q8NGJ5 315 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 NRG4Q8WWG1 115 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 CYGBQ8WWM9 190 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 MBOAT4Q96T53 435 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 C8orf4Q9NR00 106 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 CMC2Q9NRP2 79 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 IMPAD1Q9NX62 359 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 NDRG3Q9UGV2 375 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 COA3Q9Y2R0 106 aaPredicted RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 GMPPBQ9Y5P6 360 aa15.33■□□□□ 0.04
NXF1-216ENST00000533499 KLF2Q9Y5W3 355 aaPredicted RBP15.33■□□□□ 0.04
NXF1-216ENST00000533499 ZAR1LA6NP61 321 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 PRR23D1E9PI22 279 aaPredicted RBP15.32■□□□□ 0.04
NXF1-216ENST00000533499 SURF4O15260 269 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 AHCYL1O43865 530 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 HLA-DQA2P01906 255 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 GYPBP06028 91 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 PRR23D2P0DMB1 279 aaPredicted RBP15.32■□□□□ 0.04
NXF1-216ENST00000533499 CRABP1P29762 137 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 CCKARP32238 428 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 TBRG1Q3YBR2 411 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 KLHL12Q53G59 568 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 OTPQ5XKR4 325 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 FBXW10Q5XX13 1052 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 ANKRD16Q6P6B7 361 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 TCEANCQ8N8B7 351 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 NPEPL1Q8NDH3 523 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 FAM81AQ8TBF8 368 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 NMD3Q96D46 503 aaKnown RBP15.32■□□□□ 0.04
NXF1-216ENST00000533499 MUCL1Q96DR8 90 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 IL4I1Q96RQ9 567 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 C1QTNF6Q9BXI9 259 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 OR51V1Q9H2C8 321 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 VCX3BQ9H321 246 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 TMEM38BQ9NVV0 291 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 B9D1Q9UPM9 204 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 ICE1Q9Y2F5 2266 aa15.32■□□□□ 0.04
NXF1-216ENST00000533499 TLX2O43763 284 aaPredicted RBP15.31■□□□□ 0.04
NXF1-216ENST00000533499 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
NXF1-216ENST00000533499 GPANK1O95872 356 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms