RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 KNTC1P50748 2209 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 EEF1E1-BLOC1S5C9J1V9 151 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 F5H5P2 479 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 AIPO00170 330 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 IL33O95760 270 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 LIPCP11150 499 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 HTR2CP28335 458 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 CLDN20P56880 219 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 CXADRP78310 365 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 PTP4A1Q93096 173 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 FAM3DQ96BQ1 224 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 C10orf90Q96M02 699 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 C20orf85Q9H1P6 137 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 FLRT3Q9NZU0 649 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 STEAP1Q9UHE8 339 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 ETV7Q9Y603 341 aa10.26□□□□□ -0.77
PCDHGB4-201ENST00000519479 IDSB3KWA1 339 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 F5H0A9 414 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 BHLHE40O14503 412 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 P04436 131 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 NAT1P18440 290 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 CBX5P45973 191 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 LSSP48449 732 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZNF136P52737 540 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 PLGLB1Q02325 96 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 CHRFAM7AQ494W8 412 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 EMC4Q5J8M3 183 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 GLYATL3Q5SZD4 288 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 CD163Q86VB7 1156 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 GAREM1Q9H706 876 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 LSM2Q9Y333 95 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 HRKO00198 91 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 HMGB3O15347 200 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ALX3O95076 343 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 IFNA21P01568 189 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 C1QBP02746 253 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 RBMS2Q15434 407 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 PDSS1Q5T2R2 415 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 KTI12Q96EK9 354 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 CPNE2Q96FN4 548 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 PPA2Q9H2U2 334 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZMAT3Q9HA38 289 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 MCCC2Q9HCC0 563 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 FANCFQ9NPI8 374 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 LAMA2P24043 3122 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ALPK2Q86TB3 2170 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 OR6C68A6NDL8 312 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 FRG2CA6NGY1 282 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 GABARAPH6UMI1 98 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 M0R296 226 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ALOX12BO75342 701 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 FARS2O95363 451 aaKnown RBP10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 IFNGR1P15260 489 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 TAS2R19P59542 299 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 RIPPLY1Q0D2K3 151 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZNF74Q16587 644 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 LRRC69Q6ZNQ3 347 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 DCXRQ7Z4W1 244 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZNF615Q8N8J6 731 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 OR13C9Q8NGT0 318 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 OR14L1PQ8NHC6 308 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 MIXL1Q9H2W2 232 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ZNF160Q9HCG1 818 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 BRWD1Q9NSI6 2320 aa10.25□□□□□ -0.77
PCDHGB4-201ENST00000519479 ATF1P18846 271 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 GALP22466 123 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 CCDC74AQ96AQ1 378 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 DCBLD2Q96PD2 775 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 EMC6Q9BV81 110 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 C1orf198Q9H425 327 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 PTPRDP23468 1912 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 SULT1B1O43704 296 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 IGHA1P01876 353 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 CDK2P24941 298 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 AGTR1P30556 359 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 YOD1Q5VVQ6 348 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 CBLN3Q6UW01 205 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 H1FNTQ75WM6 255 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 COMTD1Q86VU5 262 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 GCDHQ92947 438 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 FOXRED1Q96CU9 486 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 SEC22CQ9BRL7 303 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 SARGQ9BW04 601 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 NUDT9Q9BW91 350 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 MMP25Q9NPA2 562 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 PTTG3PQ9NZH4 202 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 VSX1Q9NZR4 365 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 CHRNA9Q9UGM1 479 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 KCNG2Q9UJ96 466 aa10.24□□□□□ -0.77
PCDHGB4-201ENST00000519479 PLXNA3P51805 1871 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms