RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 A0A1W2PPW3 197 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 ELOVL7A1L3X0 281 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 TSPAN19P0C672 248 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 IGFBP5P24593 272 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 APEX1P27695 318 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 CRYBA2P53672 197 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 UGT2B15P54855 530 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 SELENOWP63302 87 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 MRPS34P82930 218 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 TEKQ02763 1124 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 MELKQ14680 651 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 PCGF3Q3KNV8 242 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 CYBRD1Q53TN4 286 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 FAM120AOSQ5T036 256 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 LRRC17Q8N6Y2 441 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 RBM15BQ8NDT2 890 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 OR4K5Q8NGD3 323 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 RP9Q8TA86 221 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF519Q8TB69 540 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 ASB10Q8WXI3 467 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 PRRC1Q96M27 445 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 WACQ9BTA9 647 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 ALG12Q9BV10 488 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 NDEL1Q9GZM8 345 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 SIAEQ9HAT2 523 aa12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 ANK3Q12955 4377 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-203ENST00000507004 PHF1O43189 567 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 LILRA1O75019 489 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 TRMUO75648 421 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 TFP02787 698 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 APLNRP35414 380 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 LIPNQ5VXI9 398 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 TSPYL5Q86VY4 417 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 NKAIN4Q8IVV8 208 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 RBP7Q96R05 134 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 TXNIPQ9H3M7 391 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 CCDC134Q9H6E4 229 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 CCNB1IP1Q9NPC3 277 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 FGFR1OP2Q9NVK5 253 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 DNHD1Q96M86 4753 aa12.4□□□□□ -0.42
HMGCS1-203ENST00000507004 IGLV3-9A0A075B6K5 115 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 A6NIZ1 184 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 B4DSR2 109 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 CCDC22O60826 627 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 SASH3O75995 380 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 KRT34O76011 436 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 F13BP05160 661 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF250P15622 560 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 AQP2P41181 271 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 DVL1P1P54792 670 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 CDH15P55291 814 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 RAP1BP61224 184 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 RAP1AP62834 184 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 HSF2Q03933 536 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 RNF113BQ8IZP6 322 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 SYNPRQ8TBG9 265 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF347Q96SE7 839 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 SH3GL3Q99963 347 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 SYT3Q9BQG1 590 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-203ENST00000507004 IFNW1P05000 195 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 IGFBP1P08833 259 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 LIPAP38571 399 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 SLC9A3P48764 834 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 UCP2P55851 309 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 PCBD1P61457 104 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 TRAM2Q15035 370 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 CR1LQ2VPA4 569 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 WDFY1Q8IWB7 410 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 OFCC1Q8IZS5 231 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 ZCCHC24Q8N2G6 241 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms