RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 UGT2B15P54855 530 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 RPL18Q07020 188 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 MAPRE2Q15555 327 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 MOGQ16653 247 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 TBC1D28Q2M2D7 210 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 RABL3Q5HYI8 236 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 LRP11Q86VZ4 500 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 NOXO1Q8NFA2 376 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 SGTBQ96EQ0 304 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF416Q9BWM5 594 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 TMEM120AQ9BXJ8 343 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 BCL2L14Q9BZR8 327 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 KCNN2Q9H2S1 579 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 INIPQ9NRY2 104 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 SLCO1C1Q9NYB5 712 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 RIMS3Q9UJD0 308 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 NPIPB13A6NJU9 1138 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 NPIPB4C9JG80 1138 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 TFP02787 698 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 HPXP02790 462 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF250P15622 560 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 ACADSP16219 412 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 TCN1P20061 433 aaPredicted RBP17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 SEC24CP53992 1094 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 TRIP10Q15642 601 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 NKPD1Q17RQ9 610 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 C10orf128Q5T292 105 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 RFLNBQ8N5W9 214 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 RBM15BQ8NDT2 890 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF519Q8TB69 540 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 TMEM239Q8WW34 195 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 ASB10Q8WXI3 467 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 C11orf40Q8WZ69 217 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 SMURF2Q9HAU4 748 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 MED31Q9Y3C7 131 aa17.12■□□□□ 0.33
UBE2D3-220ENST00000505307 IGLV3-9A0A075B6K5 115 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 GMNCA6NCL1 334 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 FXYD1O00168 92 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 F13BP05160 661 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 TSPAN19P0C672 248 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 COL8A2P25067 703 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 IFNA8P32881 189 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 SRP14P37108 136 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 KLF3P57682 345 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 MAD2L1BPQ15013 274 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 TAF11Q15544 211 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 PCGF3Q3KNV8 242 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 DEF8Q6ZN54 512 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 NKAIN4Q8IVV8 208 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 PCYOX1LQ8NBM8 494 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 SYNPRQ8TBG9 265 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 TMEM255BQ8WV15 326 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 SNX33Q8WV41 574 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF347Q96SE7 839 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 C19orf24Q9BVV8 132 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 RACGAP1Q9H0H5 632 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 SIAEQ9HAT2 523 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 GID8Q9NWU2 228 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 TAAR3PQ9P1P4 343 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 MYEF2Q9P2K5 600 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 FZR1Q9UM11 496 aa17.11■□□□□ 0.33
UBE2D3-220ENST00000505307 MRASO14807 208 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 TRMUO75648 421 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 FAM157BP0CG42 384 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 SAGP10523 405 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 NAT2P11245 290 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 APLNRP35414 380 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 AQP2P41181 271 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 UCP2P55851 309 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 MRPS34P82930 218 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 RUNX1T1Q06455 604 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 PIN1Q13526 163 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 CCNIQ14094 377 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 TMEM154Q6P9G4 183 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 UNQ6126/PRO20091Q6UXV3 157 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 GLCCI1Q86VQ1 547 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 SYT14Q8NB59 555 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 PFN4Q8NHR9 129 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 HINT3Q9NQE9 182 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 NKIRAS2Q9NYR9 191 aa17.1■□□□□ 0.33
UBE2D3-220ENST00000505307 C17orf100A8MU93 164 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 MT-ND5P03915 603 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 LCKP06239 509 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 MMP7P09237 267 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 ARFIP2P53365 341 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 SRSF2Q01130 221 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 TEKQ02763 1124 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 HSF2Q03933 536 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 ST3GAL3Q11203 375 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 KLF10Q13118 480 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 ARMC4Q5T2S8 1044 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 C1orf174Q8IYL3 243 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 PAQR4Q8N4S7 273 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 CLDND2Q8NHS1 167 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 FNDC8Q8TC99 324 aa17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF275Q9NSD4 429 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-220ENST00000505307 C20orf141Q9NUB4 165 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms