RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 GRHPRQ9UBQ7 328 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF346Q9UL40 294 aaKnown RBP15.3■□□□□ 0.04
HDAC4-211ENST00000494800 AURKCQ9UQB9 309 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 FKBP7Q9Y680 259 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 VPS13CQ709C8 3753 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 XKRYO14609 159 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 FABP3P05413 133 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ERCC1P07992 297 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF14P17017 642 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 FUT4P22083 530 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 MSX2P35548 267 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF133P52736 654 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 RPS23P62266 143 aaKnown RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 PLP2Q04941 152 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 SNTB2Q13425 540 aaKnown RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 TNK1Q13470 666 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 EFNB3Q15768 340 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ADIPOQQ15848 244 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 MTX3Q5HYI7 312 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 CLEC2AQ6UVW9 174 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 MYPOPQ86VE0 399 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 IGFN1Q86VF2 1251 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 MEX3DQ86XN8 651 aaKnown RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 FAM86B1Q8N7N1 296 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 HDAC2Q92769 488 aaKnown RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 FAM46AQ96IP4 442 aaKnown RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 KCNK17Q96T54 332 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 SH3GL3Q99963 347 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 MUC13Q9H3R2 512 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 GSX1Q9H4S2 264 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-211ENST00000494800 SIAEQ9HAT2 523 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 NOX3Q9HBY0 568 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF224Q9NZL3 707 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 CADP27708 2225 aa15.29■□□□□ 0.04
HDAC4-211ENST00000494800 ARID1AO14497 2285 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 NDUFS7O75251 213 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 DIRAS1O95057 198 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 GADD45GO95257 159 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 SLC2A10O95528 541 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 STAMBPO95630 424 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 SERPINA5P05154 406 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 IFNGR2P38484 337 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 EFNA4P52798 201 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 MRPS34P82930 218 aaKnown RBP15.28■□□□□ 0.04
HDAC4-211ENST00000494800 SPIBQ01892 262 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 HGFACQ04756 655 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 RAB39AQ14964 217 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 SWI5Q1ZZU3 235 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 KRT80Q6KB66 452 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 TSEN54Q7Z6J9 526 aaKnown RBP15.28■□□□□ 0.04
HDAC4-211ENST00000494800 CIARTQ8N365 385 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-211ENST00000494800 OR52J3Q8NH60 311 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 NSMAFQ92636 917 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 POP5Q969H6 163 aaKnown RBP15.28■□□□□ 0.04
HDAC4-211ENST00000494800 MS4A3Q96HJ5 214 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 TSPAN32Q96QS1 320 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 LRMDAQ9H2I8 198 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 PLK3Q9H4B4 646 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 CCNB1IP1Q9NPC3 277 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 ADAM21Q9UKJ8 722 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 TMCC3Q9ULS5 477 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 CMAHPQ9Y471 501 aa15.28■□□□□ 0.04
HDAC4-211ENST00000494800 FLNAP21333 2647 aaKnown RBP15.28■□□□□ 0.04
HDAC4-211ENST00000494800 IQCMA0A1B0GVH7 501 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 SLC22A23A1A5C7 686 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 CDC42EP2O14613 210 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 NDUFB2O95178 105 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 HEXAP06865 529 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 CD14P08571 375 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 CSF3P09919 207 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 NR4A1P22736 598 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 THBS4P35443 961 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 LRRC18Q8N456 261 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 ARIH2OSQ8N7S6 290 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 LRRC75AQ8NAA5 344 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 OR1J2Q8NGS2 313 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 DHRS1Q96LJ7 313 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 SMR3AQ99954 134 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 VRK1Q99986 396 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-211ENST00000494800 IL1RAPQ9NPH3 570 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 ACTR3BQ9P1U1 418 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 SLC7A8Q9UHI5 535 aa15.27■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF469Q96JG9 3925 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-211ENST00000494800 TRBV4-1A0A0J9YWV2 114 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 RNF223E7ERA6 249 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 AHCYL1O43865 530 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 F12P00748 615 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-211ENST00000494800 SEMG1P04279 462 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 PATE4P0C8F1 98 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 ZNF35P13682 527 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 PPOXP50336 477 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 ERVK-25P63136 954 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 HSF2Q03933 536 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 FMODQ06828 376 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 SGCAQ16586 387 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 TBC1D28Q2M2D7 210 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 MST1LQ2TV78 715 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 SLC30A7Q8NEW0 376 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 ZNF519Q8TB69 540 aa15.26■□□□□ 0.03
HDAC4-211ENST00000494800 RSRC1Q96IZ7 334 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms