RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 KLHL28Q9NXS3 571 aa2.43□□□□□ -2.02
VTA1-204ENST00000491881 F11RQ9Y624 299 aaKnown RBP2.43□□□□□ -2.02
VTA1-204ENST00000491881 ANKRD11Q6UB99 2663 aaPredicted RBP2.43□□□□□ -2.02
VTA1-204ENST00000491881 CUX1P39880 1505 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 LTBP1Q14766 1721 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 BCORL1Q5H9F3 1711 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 CHD6Q8TD26 2715 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 PREX1Q8TCU6 1659 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SYNJ1O43426 1573 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SHANK2Q9UPX8 1470 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 A0A0U1RQS6 177 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 H0Y8G0 127 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 DLGAP1O14490 977 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 KMOO15229 486 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 ANGPTL7O43827 346 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 CD5LO43866 347 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 EIF3GO75821 320 aaKnown RBP eCLIP2.42□□□□□ -2.02
VTA1-204ENST00000491881 IGLV2-23P01705 113 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 TNNI1P19237 187 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 KITLGP21583 273 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 CRYBB2P43320 205 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SULT1E1P49888 294 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 NCBP2P52298 156 aaKnown RBP eCLIP2.42□□□□□ -2.02
VTA1-204ENST00000491881 ZNF136P52737 540 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 ACTR3P61158 418 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 ZNF92Q03936 586 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 BST1Q10588 318 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 C16orf72Q14CZ0 275 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SLC25A48Q6ZT89 311 aaKnown RBP2.42□□□□□ -2.02
VTA1-204ENST00000491881 LINC00173Q6ZV60 143 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 OR9K2Q8NGE7 335 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 ZNF596Q8TC21 504 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 PIBF1Q8WXW3 757 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 TUBGCP3Q96CW5 907 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SH3GL3Q99963 347 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 PKIBQ9C010 78 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 ETNK2Q9NVF9 386 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 SLC2A8Q9NY64 477 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 PSMC3IPQ9P2W1 217 aaPredicted RBP2.42□□□□□ -2.02
VTA1-204ENST00000491881 OR12D3Q9UGF7 316 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 CD84Q9UIB8 345 aa2.42□□□□□ -2.02
VTA1-204ENST00000491881 GTF3C1Q12789 2109 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 NINLQ9Y2I6 1382 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 NDUFB10O96000 172 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 CHMLP26374 656 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 HNRNPH3P31942 346 aaKnown RBP2.41□□□□□ -2.02
VTA1-204ENST00000491881 SERPINB5P36952 375 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 TAGLN2P37802 199 aaKnown RBP2.41□□□□□ -2.02
VTA1-204ENST00000491881 CYB561P49447 251 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 PLP1P60201 277 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 SLC7A9P82251 487 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 MRPS22P82650 360 aaKnown RBP2.41□□□□□ -2.02
VTA1-204ENST00000491881 PPP1R7Q15435 360 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 RSPO1Q2MKA7 263 aaPredicted RBP2.41□□□□□ -2.02
VTA1-204ENST00000491881 DEFB116Q30KQ4 102 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 ZNF691Q5VV52 312 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 LYPD2Q6UXB3 125 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 STRADAQ7RTN6 431 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 C12orf56Q8IXR9 622 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 EID2Q8N6I1 236 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 OR2L3Q8NG85 312 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 RHEBL1Q8TAI7 183 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 TMEM54Q969K7 222 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 P2RX4Q99571 388 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 METTL7AQ9H8H3 244 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 NUP50Q9UKX7 468 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 KIAA1257Q9ULG3 409 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 HPCAL4Q9UM19 191 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 PTPRKQ15262 1439 aa2.41□□□□□ -2.02
VTA1-204ENST00000491881 MKI67P46013 3256 aaKnown RBP2.41□□□□□ -2.02
VTA1-204ENST00000491881 VWDEQ8N2E2 1590 aa2.4□□□□□ -2.02
VTA1-204ENST00000491881 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 ZNF726A6NNF4 738 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 HIDE1A8MVS5 230 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 PALMO75781 387 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 FGGP02679 453 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 OMGP23515 440 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 YWHAGP61981 247 aaKnown RBP eCLIP2.4□□□□□ -2.03
VTA1-204ENST00000491881 ENPEPQ07075 957 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 TCP10Q12799 353 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 ECH1Q13011 328 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 SLAQ13239 276 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 CLINT1Q14677 625 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
VTA1-204ENST00000491881 TMEM107Q6UX40 140 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 OAFQ86UD1 273 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 SAXO1Q8IYX7 474 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 CYB561D1Q8N8Q1 229 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 Q8N976 141 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 SPATA4Q8NEY3 305 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 KCNG3Q8TAE7 436 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 CXorf40AQ8TE69 158 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 ZFP90Q8TF47 636 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 PIK3IP1Q96FE7 263 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 TPD52L3Q96J77 140 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 TSNARE1Q96NA8 513 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 RPF2Q9H7B2 306 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms