RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MOKQ9UQ07 419 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 LRRC42Q9Y546 428 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 INTS1Q8N201 2190 aaKnown RBP16.43■□□□□ 0.22
MCF2L-230ENST00000491028 IGLV1-36A0A0B4J1U3 117 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 MSTNO14793 375 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 SMNDC1O75940 238 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCF2L-230ENST00000491028 BMP5P22003 454 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 CHRNB4P30926 498 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 CENPAP49450 140 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 ZNF84P51523 738 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 ADORA2A-AS1P86434 159 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 ROR2Q01974 943 aaKnown RBP16.43■□□□□ 0.22
MCF2L-230ENST00000491028 LRFN4Q6PJG9 635 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 Q6ZT83 130 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 BEND4Q6ZU67 534 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 MRGPRGQ86SM5 289 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 OR6V1Q8N148 313 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 RFKQ969G6 155 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 HCAR1Q9BXC0 346 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 MED20Q9H944 212 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 CRLF2Q9HC73 371 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 GPR35Q9HC97 309 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 ESPL1Q14674 2120 aa16.43■□□□□ 0.22
MCF2L-230ENST00000491028 NCOA6Q14686 2063 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 IGKV1D-43A0A0B4J1Z2 117 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SNTNA6NMZ2 147 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 DCTN6O00399 190 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 IGHV3-9P01782 118 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SLC2A5P22732 501 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 BLVRAP53004 296 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SH3BGRP55822 239 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 FAPQ12884 760 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 TMED1Q13445 227 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 LCN1P1Q5VSP4 162 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 KRT80Q6KB66 452 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 LINGO2Q7L985 606 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 PROKR2Q8NFJ6 384 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 BBS1Q8NFJ9 593 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 APH1BQ8WW43 257 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 CNBD2Q96M20 576 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 ZNF582Q96NG8 517 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 TSSK2Q96PF2 358 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 OPN3Q9H1Y3 402 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 OR51V1Q9H2C8 321 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SRA1Q9HD15 236 aaKnown RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 DNAJC27Q9NZQ0 273 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SLC5A6Q9Y289 635 aa16.42■□□□□ 0.22
MCF2L-230ENST00000491028 RP1L1Q8IWN7 2480 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-230ENST00000491028 SH3D21A4FU49 640 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 SLC22A31A6NKX4 558 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 GLCEO94923 617 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 CLUP10909 449 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 MPGP29372 298 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 CDH11P55287 796 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 GLO1Q04760 184 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 CDK5R2Q13319 367 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 MED21Q13503 144 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 APOFQ13790 326 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 CEACAM16Q2WEN9 425 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 SLC25A35Q3KQZ1 300 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 KLHL12Q53G59 568 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 FOXL2NBQ6ZUU3 175 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 MEPCEQ7L2J0 689 aaKnown RBP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 BCDIN3DQ7Z5W3 292 aaKnown RBP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 ZNF610Q8N9Z0 462 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 RELL2Q8NC24 303 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 CNIH3Q8TBE1 160 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 NSMAFQ92636 917 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 RBM24Q9BX46 236 aaKnown RBP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 RERGLQ9H628 205 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 JKAMPQ9P055 326 aa16.41■□□□□ 0.22
MCF2L-230ENST00000491028 ERRFI1Q9UJM3 462 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.41■□□□□ 0.22
MCF2L-230ENST00000491028 ALPK2Q86TB3 2170 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 ZNF99A8MXY4 864 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 EEF1E1-BLOC1S5C9J1V9 151 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 EEF1E1O43324 174 aaKnown RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 ENTPD6O75354 484 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 WBP4O75554 376 aaKnown RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 GYPBP06028 91 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 COX5AP20674 150 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 LAP3P28838 519 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 HTR1FP30939 366 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 PYCR1P32322 319 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 RPS7P62081 194 aaKnown RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 P2RY6Q15077 328 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 ETFDHQ16134 617 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 NRN1LQ496H8 165 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 GLB1L2Q8IW92 636 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 GABRG1Q8N1C3 465 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 FOXB1Q99853 325 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 TAS2R16Q9NYV7 291 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 WARS2Q9UGM6 360 aaKnown RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 COA3Q9Y2R0 106 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-230ENST00000491028 UGT2A1Q9Y4X1 527 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 FREM1Q5H8C1 2179 aa16.4■□□□□ 0.22
MCF2L-230ENST00000491028 CCDC182A6NF36 153 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 A8MXE2 369 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 GAAP10253 952 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms