RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TAS2R5	Q9NYW4	299 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	GHRL	Q9UBU3	117 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NUFIP1	Q9UHK0	495 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SCP2D1	Q9UJQ7	156 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CA14	Q9ULX7	337 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	HHLA2	Q9UM44	414 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPA1	Q9UND3	350 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	DHDH	Q9UQ10	334 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	RBMX2	Q9Y388	322 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ADAM18	Q9Y3Q7	739 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ALG5	Q9Y673	324 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	LRP4	O75096	1905 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	FANCM	Q8IYD8	2048 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833		A0A0G2JK05	382 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	LOC100289279	A0A1B0GTE1	492 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	LINC00854	A0A1B0GVQ3	168 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833		A0A1W2PNV4	684 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM72	A0PK05	275 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	DCDC2B	A2VCK2	349 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	OR4C45	A6NMZ5	311 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833		C9J4A7	227 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833		E9PI62	339 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TGFBR3L	H3BV60	316 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	LINC01387	J3KSC0	135 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SLC17A2	O00624	439 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	EIF1AY	O14602	144 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SSNA1	O43805	119 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CREBL2	O60519	120 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	UPK3A	O75631	287 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SCRG1	O75711	98 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CER1	O95813	267 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	GYPB	P06028	91 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	EIF4E	P06730	217 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CHRM2	P08172	466 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	UBB	P0CG47	229 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	IFNGR1	P15260	489 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ATF1	P18846	271 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ACHE	P22303	614 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	DPP4	P27487	766 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	PRSS3	P35030	304 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	GDNF	P39905	211 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	EIF1AX	P47813	144 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	OR1D4	P47884	311 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	DNASE1L1	P49184	302 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	GFER	P55789	205 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CAV3	P56539	151 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	RAP2B	P61225	183 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	PPP1CA	P62136	330 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ADAM8	P78325	824 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	PLAUR	Q03405	335 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	EGR4	Q05215	589 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ZP2	Q05996	745 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	IKZF1	Q13422	519 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	MEF2D	Q14814	521 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	P2RY14	Q15391	338 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	RBMS2	Q15434	407 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CD226	Q15762	336 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	MPPED2	Q15777	294 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	RAB11B	Q15907	218 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ACKR1	Q16570	336 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF239	Q16600	458 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF528	Q3MIS6	628 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	OLFML2A	Q68BL7	652 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SLC25A25	Q6KCM7	469 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	LPCAT3	Q6P1A2	487 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	C3orf33	Q6P1S2	294 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	DNM1P46	Q6ZS02	220 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	PGAP1	Q75T13	922 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CPEB2	Q7Z5Q1	589 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	WDR5B	Q86VZ2	330 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ADGRG3	Q86Y34	549 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SERPINA12	Q8IW75	414 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	GLB1L2	Q8IW92	636 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	C9orf40	Q8IXQ3	194 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF519	Q8TB69	540 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	DUSP19	Q8WTR2	217 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TSEN15	Q8WW01	171 aa	Known RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	RLN3	Q8WXF3	142 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	EDA	Q92838	391 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	HGD	Q93099	445 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM106A	Q96A25	262 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	PNPLA2	Q96AD5	504 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	KTI12	Q96EK9	354 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	POM121	Q96HA1	1249 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SGCZ	Q96LD1	299 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	SCGB3A2	Q96PL1	93 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	NEDD4L	Q96PU5	975 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TSPAN32	Q96QS1	320 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	ABHD1	Q96SE0	405 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM246	Q9BRR3	403 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	NAA11	Q9BSU3	229 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	RBCK1	Q9BYM8	510 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	MMP28	Q9H239	520 aa		5.72	□□□□□ -1.49
FN1-223	ENST00000490833	TP63	Q9H3D4	680 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-223	ENST00000490833	CHST11	Q9NPF2	352 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms