RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 CMAHPQ9Y471 501 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 FARS2O95363 451 aaKnown RBP12.07□□□□□ -0.48
VTI1A-206ENST00000489142 IGF2P01344 180 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 TSPAN19P0C672 248 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-206ENST00000489142 USF1P22415 310 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-206ENST00000489142 ALDH3B1P43353 468 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 NR4A2P43354 598 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF84P51523 738 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 FHL1Q13642 323 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 TRAM2Q15035 370 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 C6orf52Q5T4I8 152 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 MALRD1Q5VYJ5 2156 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 HACD2Q6Y1H2 254 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 SLC16A14Q7RTX9 510 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 TSEN54Q7Z6J9 526 aaKnown RBP12.07□□□□□ -0.48
VTI1A-206ENST00000489142 FAM156AQ8NDB6 213 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 SLC30A7Q8NEW0 376 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 MRPL24Q96A35 216 aaKnown RBP12.07□□□□□ -0.48
VTI1A-206ENST00000489142 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 SEPHS2Q99611 448 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 RAB1BQ9H0U4 201 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 ADA2Q9NZK5 511 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 HIF3AQ9Y2N7 669 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 V9GYQ6 96 aa12.07□□□□□ -0.48
VTI1A-206ENST00000489142 CUBNO60494 3623 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 IGHV4-61A0A0C4DH41 118 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 A8MV72 311 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-206ENST00000489142 VSTM5A8MXK1 200 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 EFCAB9A8MZ26 197 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 VWC2LB2RUY7 222 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 H7C1C5 153 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 ATP8B1O43520 1251 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-206ENST00000489142 SNX3O60493 162 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 PRSS23O95084 383 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 SERPINA5P05154 406 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 DAOP14920 347 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 IFNA8P32881 189 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 LSP1P33241 339 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 CTXN1P60606 82 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 LCN6P62502 163 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 VLDLRP98155 873 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 PRKCDQ05655 676 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 SGCAQ16586 387 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 FXNQ16595 210 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 SLC36A2Q495M3 483 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 IQCCQ4KMZ1 466 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 TMEM53Q6P2H8 277 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF730Q6ZMV8 503 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 FAM86B1Q8N7N1 296 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 CMTM5Q96DZ9 223 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 BPESC1Q9GZL8 116 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 TXNIPQ9H3M7 391 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 ABCD2Q9UBJ2 740 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 SLC7A8Q9UHI5 535 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
VTI1A-206ENST00000489142 UGT2A1Q9Y4X1 527 aa12.06□□□□□ -0.48
VTI1A-206ENST00000489142 A0A087WUU8 490 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 A0A1W2PPW3 197 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 LOC390937A0A1W2PQ73 354 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 LRP5LA4QPB2 252 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 M0R233 179 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 CDC42EP2O14613 210 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 DIRAS1O95057 198 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 APEX1P27695 318 aaKnown RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 GLRXP35754 106 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 RPL27P61353 136 aaKnown RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 ERVK-25P63136 954 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 GNGT1P63211 74 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 CPLX4Q7Z7G2 160 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 OAFQ86UD1 273 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 ACOT11Q8WXI4 607 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 NMD3Q96D46 503 aaKnown RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 MDFIQ99750 246 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 NSRP1Q9H0G5 558 aaKnown RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 DENND2DQ9H6A0 471 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-206ENST00000489142 CDH20Q9HBT6 801 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 SPAG4Q9NPE6 437 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 REV1Q9UBZ9 1251 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 ENPP4Q9Y6X5 453 aa12.05□□□□□ -0.48
VTI1A-206ENST00000489142 A0A1W2PPL8 197 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CENPBD1B2RD01 187 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 SYNGR3O43761 229 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 STAMBPO95630 424 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms