RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MT-ND1P03886 318 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 MMP7P09237 267 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 SAGP10523 405 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 ZNF250P15622 560 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 ACADSP16219 412 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 AQP2P41181 271 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 UCP2P55851 309 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 LMO4P61968 165 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 MRPS11P82912 194 aaKnown RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 CBX1P83916 185 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 PIN1Q13526 163 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 CYLC2Q14093 348 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 SLC36A2Q495M3 483 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 METTL21CQ5VZV1 264 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 RINLQ6ZS11 566 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 DPPA2Q7Z7J5 298 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 LRRC18Q8N456 261 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 MOSPD2Q8NHP6 518 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 TMEM255BQ8WV15 326 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 RASSF5Q8WWW0 418 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 ASB10Q8WXI3 467 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 SGTBQ96EQ0 304 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 CDH20Q9HBT6 801 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 LPAR2Q9HBW0 351 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 HINT3Q9NQE9 182 aaKnown RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 C20orf141Q9NUB4 165 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 RIMS3Q9UJD0 308 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 NBEAL1Q6ZS30 2694 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 IGLV3-9A0A075B6K5 115 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 A0A1W2PRG6 482 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 C17orf100A8MU93 164 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 CDC14BO60729 498 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 SNAP29O95721 258 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 PTHP01270 115 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 LCKP06239 509 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 TSPAN19P0C672 248 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 GAAP10253 952 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ITGA2P17301 1181 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 CDAP32320 146 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 RAD52P43351 418 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ZNF84P51523 738 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
VPS16-208ENST00000487461 TAS2R41P59536 307 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 SELENOVP59797 346 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 NKPD1Q17RQ9 610 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 NRN1LQ496H8 165 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ARMC4Q5T2S8 1044 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 DEF8Q6ZN54 512 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 GLCCI1Q86VQ1 547 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 RBM15BQ8NDT2 890 aaKnown RBP10.42□□□□□ -0.74
VPS16-208ENST00000487461 CPEB3Q8NE35 698 aaKnown RBP10.42□□□□□ -0.74
VPS16-208ENST00000487461 NOXO1Q8NFA2 376 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 OR1J2Q8NGS2 313 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ZNF519Q8TB69 540 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 SYNPRQ8TBG9 265 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 LIPHQ8WWY8 451 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 C11orf40Q8WZ69 217 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
VPS16-208ENST00000487461 TMEM186Q96B77 213 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 LRRC58Q96CX6 371 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ECSITQ9BQ95 431 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ZNF416Q9BWM5 594 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 C1orf198Q9H425 327 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 SIAEQ9HAT2 523 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 INIPQ9NRY2 104 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 ZNF446Q9NWS9 450 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 HIF1ANQ9NWT6 349 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 UGT2A1Q9Y4X1 527 aa10.42□□□□□ -0.74
VPS16-208ENST00000487461 IGKV1D-43A0A0B4J1Z2 117 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 IQCMA0A1B0GVH7 501 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 CENPBD1B2RD01 187 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 MCIDASD6RGH6 385 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 FXYD1O00168 92 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 OR5F1O95221 314 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 SLC2A10O95528 541 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 IGF2P01344 180 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 TFP02787 698 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 PCMT1P22061 227 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 RBM34P42696 430 aaKnown RBP10.41□□□□□ -0.74
VPS16-208ENST00000487461 OR1E2P47887 323 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 KLF3P57682 345 aaPredicted RBP10.41□□□□□ -0.74
VPS16-208ENST00000487461 CCL8P80075 99 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 PLP2Q04941 152 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 PABPC1L2AQ5JQF8 200 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 C10orf128Q5T292 105 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 TMEM154Q6P9G4 183 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 HDXQ7Z353 690 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 OR8J3Q8NGG0 315 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 TMEM239Q8WW34 195 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 HDAC2Q92769 488 aaKnown RBP10.41□□□□□ -0.74
VPS16-208ENST00000487461 NMD3Q96D46 503 aaKnown RBP10.41□□□□□ -0.74
VPS16-208ENST00000487461 ZNF583Q96ND8 569 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 SH3GL1Q99961 368 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 SIKE1Q9BRV8 207 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 TMEM120AQ9BXJ8 343 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 BCL2L14Q9BZR8 327 aa10.41□□□□□ -0.74
VPS16-208ENST00000487461 LRMDAQ9H2I8 198 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms