RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CD63P08962 238 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SLC2A2P11168 524 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 ALOX5APP20292 161 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ENPP1P22413 925 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 CDAP32320 146 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SOX2P48431 317 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 CD97P48960 835 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 DSCR4P56555 118 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 BDH1Q02338 343 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ZNF684Q5T5D7 378 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 H3F3CQ6NXT2 135 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 PXKQ7Z7A4 578 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 UEVLDQ8IX04 471 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ARMC10Q8N2F6 343 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SYS1Q8N2H4 156 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 OR14L1PQ8NHC6 308 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 FNDC8Q8TC99 324 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 S100ZQ8WXG8 99 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ZBTB8AQ96BR9 441 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SMIM19Q96E16 107 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 CEP19Q96LK0 163 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 KCNK17Q96T54 332 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SACM1LQ9NTJ5 587 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 B3GALT5Q9Y2C3 310 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 PEX16Q9Y5Y5 336 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 FKBP7Q9Y680 259 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 NCOA6Q14686 2063 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 KIAA1549Q9HCM3 1950 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 LINC00854A0A1B0GVQ3 168 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 NKX2-8O15522 239 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 OGG1O15527 345 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 NEURL1O76050 574 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ABHD16AO95870 558 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 WDPCPO95876 746 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 WT1P19544 449 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 EIF1P41567 113 aaKnown RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 ZP4Q12836 540 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 MFSD13AQ14CX5 517 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SLC25A35Q3KQZ1 300 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 IDNKQ5T6J7 187 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ABHD17BQ5VST6 288 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 OR7E24Q6IFN5 339 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 NHLRC1Q6VVB1 395 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 TMPPEQ6ZT21 453 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 GLRX5Q86SX6 157 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 CCDC190Q86UF4 302 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 RAB43Q86YS6 212 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 OR51A4Q8NGJ6 313 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 OTOSQ8NHW6 89 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ABTB1Q969K4 478 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 SGCZQ96LD1 299 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 KLHL15Q96M94 604 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 NKX3-1Q99801 234 aaPredicted RBP5.56□□□□□ -1.52
CLK1-210ENST00000473565 SRXN1Q9BYN0 137 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 ELOVL3Q9HB03 270 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 EMC7Q9NPA0 242 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 FRRS1LQ9P0K9 344 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 FBXL3Q9UKT7 428 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 PIEZO2Q9H5I5 2752 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 SPTBN4Q9H254 2564 aa5.56□□□□□ -1.52
CLK1-210ENST00000473565 A0A1W2PPL8 197 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 FAM166BA8MTA8 275 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 HPGDSO60760 199 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 CBR3O75828 277 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 PAHP00439 452 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 PNPP00491 289 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 KRT8P05787 483 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 GDF1P27539 372 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 DAP3P51398 398 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 PPP5CP53041 499 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 B3GALT5-AS1P59052 145 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 EIF2B1Q14232 305 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 SPANXN2Q5MJ10 180 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 TUBA3EQ6PEY2 450 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 FAM220AQ7Z4H9 259 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 CENPSQ8N2Z9 138 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 MIB2Q96AX9 1013 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 NTNG2Q96CW9 530 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 MAP6Q96JE9 813 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 ZNF385AQ96PM9 386 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 SDHCQ99643 169 aaPredicted RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 ATF6BQ99941 703 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 SH3GL3Q99963 347 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 SEC61A2Q9H9S3 476 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 CLEC4AQ9UMR7 237 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 SLC22A13Q9Y226 551 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 DOCK7Q96N67 2140 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 FREM1Q5H8C1 2179 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 SVILO95425 2214 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 A0A075B6Q4 140 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 TRABD2BA6NFA1 517 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 PIN1P1O15428 100 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 SC5DO75845 299 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 ADH6P28332 368 aa5.55□□□□□ -1.52
CLK1-210ENST00000473565 RBMS1P29558 406 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 NOVA1P51513 510 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 SUCLG1P53597 346 aaKnown RBP5.55□□□□□ -1.52
CLK1-210ENST00000473565 CLDN17P56750 224 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms