RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 CDH20Q9HBT6 801 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 CCNB1IP1Q9NPC3 277 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 RHCGQ9UBD6 479 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 SLC7A8Q9UHI5 535 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
HOXB3-206ENST00000471459 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
HOXB3-206ENST00000471459 ALPK2Q86TB3 2170 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SYNGR3O43761 229 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SNX3O60493 162 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 CRLF1O75462 422 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 LY6HO94772 140 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 ADRA2AP08913 450 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 PATE4P0C8F1 98 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SLC9A3P48764 834 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 CTXN1P60606 82 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 RPL27P61353 136 aaKnown RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 HSF2Q03933 536 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 PRKCDQ05655 676 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SGCAQ16586 387 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 TBC1D28Q2M2D7 210 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 GLYATQ6IB77 296 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 MRPL24Q96A35 216 aaKnown RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 ALG12Q9BV10 488 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 MYLK2Q9H1R3 596 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 ANKRD19PQ9H560 264 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 KRCC1Q9NPI7 259 aaPredicted RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 REV1Q9UBZ9 1251 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 SAMD4AQ9UPU9 718 aaKnown RBP12.88□□□□□ -0.35
HOXB3-206ENST00000471459 TMEM5Q9Y2B1 443 aa12.88□□□□□ -0.35
HOXB3-206ENST00000471459 TLN2Q9Y4G6 2542 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 M0R233 179 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 DAOP14920 347 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ITGA2P17301 1181 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 APLNRP35414 380 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 RAD52P43351 418 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 MRPS34P82930 218 aaKnown RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 VLDLRP98155 873 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 TOP3AQ13472 1001 aaPredicted RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 GGTLC2Q14390 218 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 MOGQ16653 247 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 C10orf128Q5T292 105 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ARMC4Q5T2S8 1044 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 MBOAT2Q6ZWT7 520 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 FOXN4Q96NZ1 517 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 EIF3KQ9UBQ5 218 aaKnown RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 GRHPRQ9UBQ7 328 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ZNF346Q9UL40 294 aaKnown RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 ENPP4Q9Y6X5 453 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 NSD1Q96L73 2696 aaPredicted RBP12.87□□□□□ -0.35
HOXB3-206ENST00000471459 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
HOXB3-206ENST00000471459 J3KTA2 159 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 XKRYO14609 159 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 GPRIN2O60269 458 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 IFNA2P01563 188 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
HOXB3-206ENST00000471459 NCK1P16333 377 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 MAKP20794 623 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 DRD4P21917 467 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 NR4A2P43354 598 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 GZMKP49863 264 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 MNAT1P51948 309 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 SMIM11AP58511 58 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 PCBD1P61457 104 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
HOXB3-206ENST00000471459 UBASH3BQ8TF42 649 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 C11orf40Q8WZ69 217 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 NSMAFQ92636 917 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 LRRC37BQ96QE4 947 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 GMPR2Q9P2T1 348 aaKnown RBP12.86□□□□□ -0.35
HOXB3-206ENST00000471459 ABCD2Q9UBJ2 740 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 ARL2BPQ9Y2Y0 163 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 ABCA2Q9BZC7 2435 aa12.86□□□□□ -0.35
HOXB3-206ENST00000471459 A0A087WUU8 490 aa12.85□□□□□ -0.35
HOXB3-206ENST00000471459 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms