RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TMED5Q9Y3A6 229 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 GOLT1BQ9Y3E0 138 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 SYNRGQ9UMZ2 1314 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 SIRPB1O00241 398 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 DNALI1O14645 258 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 LSM1O15116 133 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 CACNG3O60359 315 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 H6PDO95479 791 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC25A27O95847 323 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 TSPAN13O95857 204 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 SFTPCP11686 197 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC1A1P43005 524 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 RPS10P46783 165 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF658BQ4V348 819 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 CCNJQ5T5M9 372 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 C22orf42Q6IC83 251 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 ANKRD26P1Q6NSI1 321 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 REEP3Q6NUK4 255 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 IQCKQ8N0W5 287 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR4A4PQ8NGN8 299 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR10R2Q8NGX6 335 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 GABARAPL3Q9BY60 117 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 DNTTIP1Q9H147 329 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 RPF2Q9H7B2 306 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 ANKRA2Q9H9E1 313 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF160Q9HCG1 818 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 DEC1Q9P2X7 70 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 LSM7Q9UK45 103 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 ING4Q9UNL4 249 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 MAPK8IP3Q9UPT6 1336 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 CDC42BPBQ9Y5S2 1711 aa2.88□□□□□ -1.95
CDC42BPA-211ENST00000466538 CNTNAP1P78357 1384 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 IGLV11-55A0A075B6I3 123 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 RAB3DO95716 219 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 ANXA5P08758 320 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CALM1P0DP23 149 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CALM2P0DP24 149 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CALM3P0DP25 149 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 EIF2S2P20042 333 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 AQP2P41181 271 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 RAB9AP51151 201 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CRISP3P54108 245 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 RPS15P62841 145 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 REG3AQ06141 175 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 TCP10Q12799 353 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 MERTKQ12866 999 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 IL18Q14116 193 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 PSG5Q15238 335 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CHRNA6Q15825 494 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 TTLL9Q3SXZ7 439 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF530Q6P9A1 599 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 LYPD2Q6UXB3 125 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 SSX9Q7RTT3 188 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC16A14Q7RTX9 510 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 HDDC2Q7Z4H3 204 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 BIVMQ86UB2 503 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 ARIH2OSQ8N7S6 290 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 DUSP18Q8NEJ0 188 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 LRRC58Q96CX6 371 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF799Q96GE5 643 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 GSDMAQ96QA5 445 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC29A1Q99808 456 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 MTG1Q9BT17 334 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 MRPL37Q9BZE1 423 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 LGALS13Q9UHV8 139 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 VANGL2Q9ULK5 521 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 CAB39Q9Y376 341 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 F11RQ9Y624 299 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 ASTN1O14525 1302 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 NFASCO94856 1347 aa2.87□□□□□ -1.95
CDC42BPA-211ENST00000466538 PLAC8L1A1L4L8 177 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR2AG2A6NM03 316 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 CASQ2O14958 399 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 KLHL41O60662 606 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 SS18L1O75177 396 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 SUPT3HO75486 399 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 CLPXO76031 633 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 IGLV2-23P01705 113 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 RETP07949 1114 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 MYL2P10916 166 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 PSG2P11465 335 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 FOLR1P15328 257 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF250P15622 560 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 HOXA9P31269 272 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 HRH1P35367 487 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 CDKN1BP46527 198 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 HERVK_113P61574 105 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ACTA2P62736 377 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ACTG2P63267 376 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ACTC1P68032 377 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ACTA1P68133 377 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 GBE1Q04446 702 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 MRPL23Q16540 153 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 PGGHGQ32M88 737 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 LY6G6FQ5SQ64 297 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ANKRD22Q5VYY1 191 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms