RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 PLCL2Q9UPR0 1127 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 CDC14CA4D256 554 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 DISC1C4P0D8 188 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 FAUP35544 74 aaKnown RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 FHL1Q13642 323 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 CCINQ13939 588 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 CDH26Q8IXH8 852 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 OR14A16Q8NHC5 309 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 MIB2Q96AX9 1013 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 NPAS1Q99742 590 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 DPYSL5Q9BPU6 564 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 EXOSC3Q9NQT5 275 aaKnown RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 ATXN7L1Q9ULK2 861 aaPredicted RBP11.27□□□□□ -0.6
HDAC4-208ENST00000463007 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.6
HDAC4-208ENST00000463007 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-208ENST00000463007 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-208ENST00000463007 ALOX12BO75342 701 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 ATG12O94817 140 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 GPR75O95800 540 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 ITGA5P08648 1049 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 PSG6Q00889 435 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 RAB30Q15771 203 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 SMAD2Q15796 467 aaKnown RBP11.27□□□□□ -0.61
HDAC4-208ENST00000463007 PRICKLE4Q2TBC4 344 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 KDM8Q8N371 416 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 STEAP2Q8NFT2 490 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 OR1J2Q8NGS2 313 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 PHOSPHO1Q8TCT1 267 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 CMKLR1Q99788 373 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
HDAC4-208ENST00000463007 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 PIAS3Q9Y6X2 628 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 SPACA6W5XKT8 324 aa11.27□□□□□ -0.61
HDAC4-208ENST00000463007 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 F5H0A9 414 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-208ENST00000463007 GLSO94925 669 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-208ENST00000463007 PRSS3P35030 304 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 GRK6P43250 576 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 BTG2P78543 158 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ALKBH1Q13686 389 aaKnown RBP11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ZNHIT3Q15649 155 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-208ENST00000463007 MEP1BQ16820 701 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CBLN3Q6UW01 205 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 BAIAP2L2Q6UXY1 529 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF227Q86WZ6 799 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SLC35F3Q8IY50 421 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 GALNT16Q8N428 558 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SPICQ8N5J4 248 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 TEX19Q8NA77 164 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 POMGNT2Q8NAT1 580 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SMRP1Q8NCR6 262 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 TCEAL2Q9H3H9 227 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 KCNG2Q9UJ96 466 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 A8MXK9 166 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CD53P19397 219 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 MST1P26927 711 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 AVPR2P30518 371 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SPOCK1Q08629 439 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 C2orf76Q3KRA6 126 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 STEAP1BQ6NZ63 245 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ULK3Q6PHR2 472 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 PRSS58Q8IYP2 241 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 SYS1Q8N2H4 156 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 ACBD4Q8NC06 268 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CHST4Q8NCG5 386 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 OR5M9Q8NGP3 310 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 LDAHQ9H6V9 325 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 DUSP22Q9NRW4 184 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 PRAMEF2O60811 474 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 AKR7A3O95154 331 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 RAB3DO95716 219 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CAPZA1P52907 286 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 MANEAQ5SRI9 462 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 BIVMQ86UB2 503 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 FOXRED2Q8IWF2 684 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CAMKVQ8NCB2 501 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 OR13H1Q8NG92 308 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 CMBLQ96DG6 245 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
HDAC4-208ENST00000463007 KANTRA0A1W2PQU2 76 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 TMEM235A6NFC5 223 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 EIF1AYO14602 144 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms