RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 RERGLQ9H628 205 aa12.8□□□□□ -0.36
NCKIPSD-207ENST00000453349 VSX1Q9NZR4 365 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-207ENST00000453349 ENOPH1Q9UHY7 261 aa12.8□□□□□ -0.36
NCKIPSD-207ENST00000453349 KLHL21Q9UJP4 597 aa12.8□□□□□ -0.36
NCKIPSD-207ENST00000453349 SLC25A15Q9Y619 301 aa12.8□□□□□ -0.36
NCKIPSD-207ENST00000453349 GCN1Q92616 2671 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 A6NNC1 897 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SLC16A7O60669 478 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 KHDRBS3O75525 346 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SEC14L2O76054 403 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 IFNGP01579 166 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 HMGN1P05114 100 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 NPR2P20594 1047 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SSTR2P30874 369 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 GRK5P34947 590 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 CAPZA2P47755 286 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 CDK5Q00535 292 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 FMODQ06828 376 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 GINS1Q14691 196 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SGCAQ16586 387 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 NRN1LQ496H8 165 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 KDM4DQ6B0I6 523 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 DNM1P34Q6PK57 102 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 PTCHD4Q6ZW05 846 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SLC22A24Q8N4F4 322 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SDR9C7Q8NEX9 313 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 OR4Q3Q8NH05 313 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 NMD3Q96D46 503 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SYT4Q9H2B2 425 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 MOV10Q9HCE1 1003 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 SRA1Q9HD15 236 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 TMEM38BQ9NVV0 291 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 ORC6Q9Y5N6 252 aa12.79□□□□□ -0.36
NCKIPSD-207ENST00000453349 IGKV1D-43A0A0B4J1Z2 117 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 A0A1W2PPL8 197 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 CD79AP11912 226 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 B4GALT1P15291 398 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 IGFBP5P24593 272 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 CENPAP49450 140 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 MRPS34P82930 218 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 EME1Q96AY2 570 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 PIK3IP1Q96FE7 263 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 ESRP2Q9H6T0 727 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 RNF121Q9H920 327 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 SIAEQ9HAT2 523 aa12.78□□□□□ -0.36
NCKIPSD-207ENST00000453349 MYO18BQ8IUG5 2567 aa12.77□□□□□ -0.36
NCKIPSD-207ENST00000453349 RIIAD1A6NNX1 92 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 H0YHG0 523 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 M0R1B8 84 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 UBL3O95164 117 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ANPEPP15144 967 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZNF3P17036 446 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 CDAP32320 146 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZNF83P51522 516 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 NR1H2P55055 460 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 PPP2R2BQ00005 443 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 TLE4Q04727 773 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 DAG1Q14118 895 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 PTGES3Q15185 160 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 RCN1Q15293 331 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ETFDHQ16134 617 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ACSM5Q6NUN0 579 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZBTB49Q6ZSB9 765 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 SKA3Q8IX90 412 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC37A3Q8NCC5 494 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 PLPPR2Q96GM1 343 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 SH3GL3Q99963 347 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 DCLRE1BQ9H816 532 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 RPRD1BQ9NQG5 326 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 B9D1Q9UPM9 204 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 COA3Q9Y2R0 106 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.37
NCKIPSD-207ENST00000453349 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 CBR1P16152 277 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 CTLA4P16410 223 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 PAICSP22234 425 aaKnown RBP12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 LAP3P28838 519 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 ARR3P36575 388 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 ALDH3A2P51648 485 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 RAD23AP54725 363 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms