RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RBBP6Q7Z6E9 1792 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GFYI3L273 518 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ENSAO43768 121 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FBXO24O75426 580 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GLAP06280 429 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SERPINF1P36955 418 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 MAP2K6P52564 334 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RPL27P61353 136 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GAB1Q13480 694 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 IHHQ14623 411 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SPCS2Q15005 226 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PYCR3Q53H96 274 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PELI3Q8N2H9 469 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FAM109AQ8N4B1 249 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR1S2Q8NGQ3 325 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 LIPHQ8WWY8 451 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FAM3DQ96BQ1 224 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 AMBRA1Q9C0C7 1298 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CDCP1Q9H5V8 836 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SMCO4Q9NRQ5 59 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 HIF1ANQ9NWT6 349 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GPR55Q9Y2T6 319 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PLXNA1Q9UIW2 1896 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CKAP5Q14008 2032 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 DOCK3Q8IZD9 2030 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SDHAP31040 664 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TRIM23P36406 574 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 LGALS4P56470 323 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR1D5P58170 312 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF628Q5EBL2 1059 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ESPNLQ6ZVH7 1005 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NAXDQ8IW45 347 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR13C9Q8NGT0 318 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CORO2AQ92828 525 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ARRDC3Q96B67 414 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SH3BGRL2Q9UJC5 107 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 KIR2DS1A0A191URI9 304 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SLC5A10A0PJK1 596 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM127O75204 238 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TPPPO94811 219 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF728P0DKX0 622 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PIPP12273 146 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CD22P20273 847 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 KIR2DS4P43632 304 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CCL11P51671 97 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 LCN6P62502 163 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 COL9A2Q14055 689 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FAM53BQ14153 422 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 KIR2DS1Q14954 304 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SEMA6DQ8NFY4 1073 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR13F1Q8NGS4 319 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SLC22A12Q96S37 553 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 DAPP1Q9UN19 280 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SSUH2Q9Y2M2 353 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 A0A087WV62 115 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PAPLNO95428 1278 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FABP1P07148 127 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TACR1P25103 407 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 AKR1C1Q04828 323 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SLC9A3R2Q15599 337 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SMN1Q16637 294 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FAM71E1Q6IPT2 247 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 Q6ZRG5 221 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OVCH1Q7RTY7 1134 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PRICKLE2Q7Z3G6 844 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NAA40Q86UY6 237 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ANGPTL5Q86XS5 388 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GCNT2Q8N0V5 402 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SLC30A7Q8NEW0 376 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 EMG1Q92979 244 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SDF2Q99470 211 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 MKRN2Q9H000 416 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NPFFR2Q9Y5X5 522 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 F5P12259 2224 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PMS2P1A4D2B8 440 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF891A8MT65 544 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 DEGS1O15121 323 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PHF1O43189 567 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RFX2P48378 723 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GSK3AP49840 483 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CCR5P51681 352 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SUB1P53999 127 aaKnown RBP eCLIP5.02□□□□□ -1.614e-6■■■■■ 28.5
VPS13C-204ENST00000395898 BAXQ07812 192 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 KDM8Q8N371 416 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 LGALS14Q8TCE9 139 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR11A1Q9GZK7 315 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RIMS4Q9H426 269 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.02□□□□□ -1.613e-6■■■■□ 26.5
VPS13C-204ENST00000395898 A6NIN4 97 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 NCR1O76036 304 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DFFBO76075 338 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CLDN1O95832 211 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LIPCP11150 499 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF26P17031 533 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ARR3P36575 388 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 RPS23P62266 143 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SNTB1Q13884 538 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C1orf140Q5VVS0 124 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 OR13H1Q8NG92 308 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 APH1AQ96BI3 265 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms