RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OPALINQ96PE5 141 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 OR51B6Q9H340 312 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 VSTM5A8MXK1 200 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 FTCDNL1E5RQL4 147 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 KLRC4-KLRK1H3BQV0 150 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CDC42EP2O14613 210 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC2A1P11166 492 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 RFC3P40938 356 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 FXNQ16595 210 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC22A6Q4U2R8 563 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SFXN4Q6P4A7 337 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 OR10G3Q8NGC4 313 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SCGB3A2Q96PL1 93 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 MRI1Q9BV20 369 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 OR10A2Q9H208 303 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 FBXL3Q9UKT7 428 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CHD5Q8TDI0 1954 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CCDC187A0A096LP49 1063 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 C4orf51C9J302 202 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 NTN1O95631 604 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CDK10Q15131 360 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 STK11Q15831 433 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 BORCS8Q96FH0 119 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 NOSIPQ9Y314 301 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 HMX3A6NHT5 357 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 D6RAR5 112 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 CRTAPO75718 401 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 HRGP04196 525 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 SOX18P35713 384 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 GLP1RP43220 463 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 ZXDAP98168 799 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 RSU1Q15404 277 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 TAAR9Q96RI9 348 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
SHROOM1-203ENST00000378679 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 MT-CO3P00414 261 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 PAHP00439 452 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 TP53P04637 393 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 HTR5AP47898 357 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 MTNR1BP49286 362 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 CDK5Q00535 292 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 RIN1Q13671 783 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 MRGPRX4Q96LA9 322 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 CDH20Q9HBT6 801 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 TAS2R8Q9NYW2 309 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ALG5Q9Y673 324 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 GPR171O14626 319 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ACTBP60709 375 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ACTG1P63261 375 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF74Q16587 644 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 SPIN3Q5JUX0 258 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 CORO6Q6QEF8 472 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 TMEM178AQ8NBL3 297 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 RADILQ96JH8 1075 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC6A7Q99884 636 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ZPBPQ9BS86 351 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 MMP25Q9NPA2 562 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 FZD7O75084 574 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 RFPL3O75679 317 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 HTR3BO95264 441 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 PTH2RP49190 550 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 PSMA6P60900 246 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 GABREP78334 506 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF141Q15928 474 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 PCGF3Q3KNV8 242 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF321PQ8N8H1 164 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 OR10A4Q9H209 315 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 SLA2Q9H6Q3 261 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 FGF20Q9NP95 211 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 P4HTMQ9NXG6 502 aa12.88□□□□□ -0.35
SHROOM1-203ENST00000378679 LOC102725191A0A1B0GVB3 256 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 A0A1W2PR77 199 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CTSBP07858 339 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 AMY2BP19961 511 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 TGM1P22735 817 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms