RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FKRPQ9H9S5 495 aa12.46□□□□□ -0.41
C9orf47-203ENST00000375851 CHST11Q9NPF2 352 aa12.46□□□□□ -0.41
C9orf47-203ENST00000375851 TRABD2BA6NFA1 517 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 MYF5P13349 255 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 KCNJ8Q15842 424 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF546Q86UE3 836 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 SLC19A3Q9BZV2 496 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 SLAMF7Q9NQ25 335 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.42
C9orf47-203ENST00000375851 ARID1AO14497 2285 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 FER1L6Q2WGJ9 1857 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 AMER3Q8N944 861 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 GALNT9Q9HCQ5 603 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ASF1BQ9NVP2 202 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 NDUFB11Q9NX14 153 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 A0A1W2PNR3 127 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 MAGEB4O15481 346 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 VAMP5O95183 116 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ITGB2P05107 769 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 TUBG1P23258 451 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 IL2RGP31785 369 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 MAP2K6P52564 334 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 PNLIPRP2P54317 469 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 AGERQ15109 404 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 STEAP1BQ6NZ63 245 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 KIRREL2Q6UWL6 708 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 C6orf15Q6UXA7 325 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 YRDCQ86U90 279 aaKnown RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 NKAIN3Q8N8D7 197 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 AHCTF1Q8WYP5 2266 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 OR6C76A6NM76 312 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CD300LBA8K4G0 201 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF814B7Z6K7 855 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF587BE7ETH6 402 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CTSVO60911 334 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CPEP16870 476 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 TNFSF4P23510 183 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 RPS27P42677 84 aaKnown RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 RRAS2P62070 204 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 HTR4Q13639 388 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 FOXB2Q5VYV0 432 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CGGBP1Q9UFW8 167 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 NEU3Q9UQ49 428 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 TRIP12Q14669 1992 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-203ENST00000375851 TMEM221A6NGB7 291 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ZGLP1P0C6A0 271 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CPT2P23786 658 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 EVI2BP34910 448 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 EMC4Q5J8M3 183 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 RNF165Q6ZSG1 346 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 KLHDC8BQ8IXV7 354 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 RAB9BQ9NP90 201 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 CHST2Q9Y4C5 530 aa12.45□□□□□ -0.42
C9orf47-203ENST00000375851 LOC100289279A0A1B0GTE1 492 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PRAMEF27A3QJZ7 478 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 TGFBR1P36897 503 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 EMDP50402 254 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ACTBL2Q562R1 376 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PRAMEF9Q5VWM5 478 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 TMEM71Q6P5X7 295 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PGAP1Q75T13 922 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 KIAA0907Q7Z7F0 614 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ANGPTL5Q86XS5 388 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 HMGCLL1Q8TB92 370 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 LRFN5Q96NI6 719 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF223Q9UK11 482 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 NINQ8N4C6 2090 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 SURF4O15260 269 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 CBX7O95931 251 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 NME1P15531 152 aaKnown RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 CCL11P51671 97 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ERVK-16P61578 105 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 LACC1Q8IV20 430 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 SLC7A5P1Q8MH63 180 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 ST8SIA1Q92185 356 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PIGTQ969N2 578 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 GON7Q9BXV9 100 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 IGHV3-9P01782 118 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 RPS18P62269 152 aaKnown RBP12.44□□□□□ -0.42
C9orf47-203ENST00000375851 SORDQ00796 357 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
C9orf47-203ENST00000375851 PRSS45Q7RTY3 260 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms