RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ZNF226Q9NYT6 803 aa10.94□□□□□ -0.66
NIF3L1-201ENST00000359683 COQ3Q9NZJ6 369 aa10.94□□□□□ -0.66
NIF3L1-201ENST00000359683 UPB1Q9UBR1 384 aa10.94□□□□□ -0.66
NIF3L1-201ENST00000359683 IGKV1D-43A0A0B4J1Z2 117 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 SMNDC1O75940 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 CLIC3O95833 236 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 GABRB1P18505 474 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 AGAP20933 346 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 CRABP1P29762 137 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 SNRPGP62308 76 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 C10orf128Q5T292 105 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 Q6ZT83 130 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 BEND4Q6ZU67 534 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 ZBTB46Q86UZ6 589 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 CPOQ8IVL8 374 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 GABRG1Q8N1C3 465 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 RHOXF1Q8NHV9 184 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 MUS81Q96NY9 551 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 IL4I1Q96RQ9 567 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 APOL4Q9BPW4 351 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 ULBP2Q9BZM5 246 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 NUAK2Q9H093 628 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 CRLF2Q9HC73 371 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 GPR35Q9HC97 309 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 RPRD1BQ9NQG5 326 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 ASB6Q9NWX5 421 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 IMPAD1Q9NX62 359 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 RAB26Q9ULW5 256 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 B9D1Q9UPM9 204 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 GPR52Q9Y2T5 361 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 FKBP7Q9Y680 259 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 HSPE1-MOB4S4R3N1 261 aa10.93□□□□□ -0.66
NIF3L1-201ENST00000359683 FAM183AA6NL82 134 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 PRR23D1E9PI22 279 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 M0R129 80 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 DCTN6O00399 190 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 DHHO43323 396 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 MPZL2O60487 215 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 SLC16A7O60669 478 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 KRT33AO76009 404 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 GNAO1P09471 354 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 PRR23D2P0DMB1 279 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 CTLA4P16410 223 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 PAICSP22234 425 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ISL1P61371 349 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ROR2Q01974 943 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 FMODQ06828 376 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 FAPQ12884 760 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ETFDHQ16134 617 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 SLC25A35Q3KQZ1 300 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 AADACL4Q5VUY2 407 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 PLBD1Q6P4A8 553 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 XKRXQ6PP77 449 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ABHD12BQ7Z5M8 362 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ENTHD1Q8IYW4 607 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 SETD9Q8NE22 299 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ZNF837Q96EG3 531 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 TSSK2Q96PF2 358 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 HCAR1Q9BXC0 346 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 MED20Q9H944 212 aa10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 SRA1Q9HD15 236 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-201ENST00000359683 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 ZNF587BE7ETH6 402 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 KHDRBS3O75525 346 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 RNF224P0DH78 156 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 MPGP29372 298 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 P2RY6Q15077 328 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 OCLNQ16625 522 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 CXXC5Q7LFL8 322 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 OR2T4Q8NH00 348 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 SSC4DQ8WTU2 575 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 ZNRF4Q8WWF5 429 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 ITLN2Q8WWU7 325 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 RBM24Q9BX46 236 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 RACGAP1Q9H0H5 632 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 PLEKHB1Q9UF11 243 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 UGT2A1Q9Y4X1 527 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 WIPF3A6NGB9 483 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 EEF1E1-BLOC1S5C9J1V9 151 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 ZG16O60844 167 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 ITGA5P08648 1049 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 CLUP10909 449 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 SPI1P17947 270 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 COX5AP20674 150 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 SLC2A5P22732 501 aa10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 DBPQ10586 325 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 MAD2L1BPQ15013 274 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-201ENST00000359683 CDSNQ15517 529 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms